Gene Information

Name : thiC (SCD_n02920)
Accession : YP_008547751.1
Strain : Sulfuricella denitrificans skB26
Genome accession: NC_022357
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2983145 - 2985016 bp
Length : 1872 bp
Strand : +
Note : K03147

DNA sequence :
ATGAACGCCAACCCCATTTTCTTGAACCTGACCGCCAGTGTCGATGAGGCTGCGGTACAACCCTTCGCCAACTCCCGCAA
GGTATACGTACCAGGTTCTCGCCCCGACATCCGCGTACCGATGCGCGAAATCAGTCTGTCCGACACCCCAGCCAGCATGG
GGGCAGAAAAAAACCCGCCCGTCTACGTCTATGACACCTCCGGACCCTACACTGACCCGGACGTTAAAATCGACATCCGT
AATGGGCTGCCGGCAATCCGCGCACCCTGGTTCGAAGCACGAGGCGACACTGAGAATCTACCCGGACTGAGCTCGGCTTA
TGGTCTGAACCGCCTGAACGACCCCTCCCTGGCAGAGATGCGCTTCAACCTGCACCGCACCCCGCGCCGCGCCAAAGCCG
GCATGAATGTCAGCCAGATGCACTACGCCCGCAAGGGCATCATCACCCCTGAAATGGAATTTGTCGCCATCCGCGAGAAC
CAGCGCCGCGACAATCTTTCCGAACTTGTCACCCGTCAGCACCCCGGCGAAAGTTTCGGCGCCGCCATTCCCAAAATCAT
CACGCCTGAATTCGTTCGTGAAGAAATTGCACGCGGTCGCGCCATTATCCCGGCAAACATCAATCACCCAGAACTCGAAC
CCGTTATCATTGGCCGTAATTTCCTGGTCAAGATTAATGGCAACATTGGCAACTCGGCGCTGGCTTCTTCGATTCACGAC
GAAGTCGAAAAAATGGTGTGGGGCATCCGCTGGGGCGCCGATACCATCATGGACCTCTCCACCGGCAAAAACATCCACGA
AACCCGTGAGTGGATTATCCGCAACAGCCCGGTGCCCATTGGCACCGTGCCAATCTATCAGGCACTGGAAAAGGTCAACG
GCAAGGCCGAAGACCTGAACTGGGAAATCTTCCGCGACACTCTGATCGAACAAGCTGAGCAAGGGGTAGATTACTTCACC
ATACACGCCGGTGTAAGGCTCGCCTATGTGCCGATGACCGCCAAGCGCATGACCGGTATCGTCTCGCGCGGTGGTTCCAT
CCTCGCCAAGTGGTGCCTGGCTCACCACAAGGAAAATTTCCTTTATACCCATTTCGAAGATATCTGCGAAATCATGAAGG
CCTATGACGTCAGTTTCAGTCTTGGGGATGGCCTGCGTCCGGGTTCTTTATATGATGCCAACGACGAAGCGCAATTCGCC
GAACTGATCACTCTGGGAGAGCTGACCAAAATCGCCTGGAAGCACGATGTCCAGACCATGATAGAAGGCCCTGGCCACGT
GCCGATGCACATGATCAAGGAAAACATGGAGCTTCAGCTTAAGCATTGTGACGAAGCGCCCTTTTACACTTTGGGACCAC
TCACCACCGACATTGCCCCCGGCTACGACCACATCACTTCCGGCATTGGGGCCGCCATGATCGGCTGGTATGGCTGTGCC
ATGCTGTGCTATGTCACACCCAAAGAGCACCTCGGCCTGCCGGACAAGGAAGACGTACGTGTCGGCATCATTACCTACAA
AATTGCCGCCCACGCTGCCGATCTGGCCAAAGGCCACCCAGGCGCGCAGATTAGAGACAATGCCCTGTCCAAAGCGCGTT
TCGAATTCCGCTGGGATGACCAGTTCAACCTCGGTCTCGACCCCGACAAAGCCAAGGAATTCCATGACGAAACCCTGCCC
AAGGATTCGGCCAAGGTCGCCCACTTCTGCTCGATGTGCGGTCCGCACTTCTGCTCCATGAAAATCACTCAGGACGTGCG
CGACTATGCGGCCGCTCAGGGCGTATCCGAGAATGAGGCGCTGGAGAAGGGAATGCAGGAAAAATCAGTGGAATTCTTGA
ATACCGGCGCAAAACTCTACCAGAAAGCCTGA

Protein sequence :
MNANPIFLNLTASVDEAAVQPFANSRKVYVPGSRPDIRVPMREISLSDTPASMGAEKNPPVYVYDTSGPYTDPDVKIDIR
NGLPAIRAPWFEARGDTENLPGLSSAYGLNRLNDPSLAEMRFNLHRTPRRAKAGMNVSQMHYARKGIITPEMEFVAIREN
QRRDNLSELVTRQHPGESFGAAIPKIITPEFVREEIARGRAIIPANINHPELEPVIIGRNFLVKINGNIGNSALASSIHD
EVEKMVWGIRWGADTIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVNGKAEDLNWEIFRDTLIEQAEQGVDYFT
IHAGVRLAYVPMTAKRMTGIVSRGGSILAKWCLAHHKENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSLYDANDEAQFA
ELITLGELTKIAWKHDVQTMIEGPGHVPMHMIKENMELQLKHCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGCA
MLCYVTPKEHLGLPDKEDVRVGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWDDQFNLGLDPDKAKEFHDETLP
KDSAKVAHFCSMCGPHFCSMKITQDVRDYAAAQGVSENEALEKGMQEKSVEFLNTGAKLYQKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 76
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 76
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 73