Gene Information

Name : pyk (SCD_n02847)
Accession : YP_008547678.1
Strain : Sulfuricella denitrificans skB26
Genome accession: NC_022357
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 2901649 - 2903091 bp
Length : 1443 bp
Strand : +
Note : K00873

DNA sequence :
ATGCAACGTAAAACTAAAATTGTCGCCACACTCGGCCCAGCCTCCAATGACCCGGAAGTGCTGAATCTTATGATGCAAGC
CGGGGTGGACGTTGTCCGCCTCAACTTTTCCCATGGCAATCCAAAAGATCACATCGATCGTGCCGAAATGGTCCGCGCCA
TGGCTCGTGCCAGAGGCAAAACGATAGGCGTACTGGTTGATCTGCAAGGCCCTAAAATTCGCATCGGCAAGTTCGAGCAC
GGAAAAATTACGCTGAAAAACGGCGATACATTCATTCTTGACAGCGATTGCACACTAGGCACCCAGGAAAGGGTAGGCCT
TGACTACAAGGAACTGCCACGTGATGCCAGTCGAGGCACCACACTGCTTCTGGACGATGGCAGGATCGTCCTCTGGGTCG
AGGAAGTACGCGGCAACGAGATCATCTGCACAGTCAAGCAAGGTGGTGCGTTGTCCAACAACAAGGGCATTAACCGCCAG
GGCGGCGGCCTGTCCGCTGCGGCGCTGACCGAAAAGGACATGGAGGACATCAAAACCGCCGCGGCCCTCAAAGCGGATTA
CCTGGCGGTGTCTTTCCCGCGCGATGGTGCCGACATGCAACTGGCACGCAAGCTGATGGTGGCAGCCGGCGGCAAAAGCA
TGCTGGTAGCCAAGATCGAACGTGCCGAAGCCATCACCAATCTGGATGAAATCCTCGATGCCTCGGATGCCATTATGGTA
GCGCGTGGCGACCTGGGTGTTGAAGTCGGCGATGCGGCAGTGCCCGCCCTGCAGAAACGCATGATTCGCATGGCGCGTGA
AAAGAACAAGCTGGCGATTACCGCCACCCAAATGATGGAATCCATGATCAACAGCCCGATCCCTACCCGGGCGGAGGTTT
CCGACGTGGCCAACGCGGTAATCGACGGCACCGACGCAGTGATGCTTTCGGCCGAAACTGCCGCTGGCCAGTACCCGGTC
GAGGCGGTGGCGGCCATGGACCGAGTATGCATCGAGGCTGAAAAGGAATATGAAACCGAATTCAGCAAGCGTCGCCTGAG
CATGCAGTTCTCCCGGGTGGATGAATCCATCGCAATGGCAACTACTTACCTTGCCAGCCACCTGAAAGTAAAGGCAATCG
CCGCACTCACAGAATCCGGCGCGACACCGCTGATGATGTCGCGCATCTACACGGATGTGCCGATCTACGCACTTTCATCC
GACGTGGGTACACGCAGGAAACTCACCCTGTTCCGGGGCGTCTACCCGGTTAACTTCAGGCCGGCCACGCAGGAGCGCGA
GCAGGTCCTGCATGAGGCCGAGGATGAGTTGCGCCGCCGGGGTGCGGTGAGAGACGATGACCTGATCATCATCACCATCG
GCGAACCGATCGGCAAATCGGGCGGAACCAACACCATGAAAATCGTCAAAGTGGGCGAAATTCGATGCACCAGCAAGGCG
TAA

Protein sequence :
MQRKTKIVATLGPASNDPEVLNLMMQAGVDVVRLNFSHGNPKDHIDRAEMVRAMARARGKTIGVLVDLQGPKIRIGKFEH
GKITLKNGDTFILDSDCTLGTQERVGLDYKELPRDASRGTTLLLDDGRIVLWVEEVRGNEIICTVKQGGALSNNKGINRQ
GGGLSAAALTEKDMEDIKTAAALKADYLAVSFPRDGADMQLARKLMVAAGGKSMLVAKIERAEAITNLDEILDASDAIMV
ARGDLGVEVGDAAVPALQKRMIRMAREKNKLAITATQMMESMINSPIPTRAEVSDVANAVIDGTDAVMLSAETAAGQYPV
EAVAAMDRVCIEAEKEYETEFSKRRLSMQFSRVDESIAMATTYLASHLKVKAIAALTESGATPLMMSRIYTDVPIYALSS
DVGTRRKLTLFRGVYPVNFRPATQEREQVLHEAEDELRRRGAVRDDDLIIITIGEPIGKSGGTNTMKIVKVGEIRCTSKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 9e-94 49
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-64 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-64 41
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-65 41
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-64 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_008547678.1 pyruvate kinase VFG0479 Protein 5e-65 41