Gene Information

Name : tkt-1 (SCD_n02844)
Accession : YP_008547675.1
Strain : Sulfuricella denitrificans skB26
Genome accession: NC_022357
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : 2.2.1.1
Position : 2897166 - 2899151 bp
Length : 1986 bp
Strand : +
Note : K00615

DNA sequence :
ATGGCAACTCGTAAAGAACTCGCGAACGCGATCCGCGTCCTTTCCATGGACGCTGTACAGAAAGCCAATTCCGGCCACCC
GGGTGCTCCCATGGGCATGGCGGAAATTGCCGAAGTGGTGTGGAACCATCACCTGCGCCACAATCCGGCCAACCCCAAGT
GGTTTGATCGCGACCGTTTCGTGCAGTCCAACGGCCATGGCTCGATGTTGATTTATTCCCTGCTACACCTGACTGGCTAC
GATCTGCCGATGGAAGAAATCAAAAAATTCCGTCAGATGCACTCCAAGACCCCGGGTCACCCTGAGTACGGCTATACCGT
CGGCGTAGAAACCACTACGGGCCCGCTCGGCCAAGGCATCACCAACGCTGTCGGCATGGCGATGGCAGAAAAACTGCTGG
CTGCCGAATTCAACAAGCCCGGCCATGAAATCGTCAATCACCACACCTACACCTTCCTCGGCGATGGCTGCATGATGGAA
GGCATTTCCCATGAAGCCTGTGCGCTGGCCGGCACTTGGGGTCTGGGCAAACTGATGGCCTTCTGGGACGACAACGGCAT
TTCCATCGACGGCCACATCGAAGGCTGGTACACCGATGACACCGCCAAGCGCTTCGAAGCTTACGGCTGGCATGTAGTTC
CTAATGTGGACGGTCATGACCCGGTGGCAATCGACGCCGCAGTGCAAGCTTGCAAGGCAGTGACCGACAAGCCTTCCCTG
ATCTGCTGCAAAACCATCATCGGCAAGGGCTCCCCAAATAAGGAAGGCACGCACGACGTGCACGGAGCCGCCCTGGGCGA
TGCCGAAATCGCCGCCACCCGTGCCAACCTGGGCTGGACCCATGGTCCTTTCGAGATTCCCAAAGACATTTACGAAGGCT
GGGATTGCCGCACCAAGGGCCAGGGACTGGAAACCCTGTGGAACAACAAGTTCGCAGAATACACCGCCGCTTTCCCTAAA
GAAGCTGCTGAATTCAAGCGCCGCATGGTTGGAGATCTGTCTGCTGACTGGAAAAAACACGCTGCCGACTTCATCGCCAA
GACCAACGAAAAAGCCGAGACCATTGCCACTCGCAAAGCCTCGCAGAACTGCATCAACGGCTTGGCTCCTGCACTGCCCG
AATTCCTCGGCGGTTCTGCCGACCTGACCGGCTCCAACCTGACCAACTGGACAGGCTGCCACCATGTCAAGGGCAAGAGT
GTTGGCAACTACATCAGCTACGGCGTGCGCGAATTCGGCATGTCCCACATCATGAACGGCATGGCTCTGCACGGTGGTCT
GCTGCCGTTCGGCGGCACCTTCCTGATGTTCTCGGAATATGCCCGCAATGCTCTGCGCATGTCCGCCCTGATGAAGCAGC
GCGTAATTTATGTGTACACCCACGACTCCATCGGTCTGGGTGAAGATGGCCCGACCCACCAGCCTGTCGAGCAGATCGCA
ACCTTACGCATGATCCCTAACATGGATGTATGGCGTCCTTGCGATACCGTTGAATCTGCTGTGTCCTGGGTTGCTGCTGT
AGACAAGAAAACCGGCCCTAGCTGCCTGATTTTCAGCCGCCAGAACCTCAACTTCCAGAAACGCAGCGACGCGCAGATTG
CAGAAATCACCAAGGGTGGTTATGTATTGGCTGATGCCGCTAACGCCAAGATGGTGCTGATCGCTACCGGGTCCGAAGTG
CAACTGGCGATGGACGCCAAGAAGGTGCTGGACGAGCAAGGTATTCCGACCCGCGTGGTTTCGATCCCTTGCACCAACGT
CTTCGACCGTCAGGATCAGGCCTACAAAGACAGCGTGTTGCTGCCTACCGTTCACAAGGTCGCCATTGAAGCTGGTGTGA
CCGACGGCTGGTACAAGTACGTGGGTCTGCGTGGCGCCGTAGTCGGCATGCACACTTTTGGCGAATCCGCCCCTGCCCCT
GAGTTGTTCAAGCACTTCGGGTTCACTGTCGAAAACGTCGTCAATACGGCCAAAGGCATTCTGTAA

Protein sequence :
MATRKELANAIRVLSMDAVQKANSGHPGAPMGMAEIAEVVWNHHLRHNPANPKWFDRDRFVQSNGHGSMLIYSLLHLTGY
DLPMEEIKKFRQMHSKTPGHPEYGYTVGVETTTGPLGQGITNAVGMAMAEKLLAAEFNKPGHEIVNHHTYTFLGDGCMME
GISHEACALAGTWGLGKLMAFWDDNGISIDGHIEGWYTDDTAKRFEAYGWHVVPNVDGHDPVAIDAAVQACKAVTDKPSL
ICCKTIIGKGSPNKEGTHDVHGAALGDAEIAATRANLGWTHGPFEIPKDIYEGWDCRTKGQGLETLWNNKFAEYTAAFPK
EAAEFKRRMVGDLSADWKKHAADFIAKTNEKAETIATRKASQNCINGLAPALPEFLGGSADLTGSNLTNWTGCHHVKGKS
VGNYISYGVREFGMSHIMNGMALHGGLLPFGGTFLMFSEYARNALRMSALMKQRVIYVYTHDSIGLGEDGPTHQPVEQIA
TLRMIPNMDVWRPCDTVESAVSWVAAVDKKTGPSCLIFSRQNLNFQKRSDAQIAEITKGGYVLADAANAKMVLIATGSEV
QLAMDAKKVLDEQGIPTRVVSIPCTNVFDRQDQAYKDSVLLPTVHKVAIEAGVTDGWYKYVGLRGAVVGMHTFGESAPAP
ELFKHFGFTVENVVNTAKGIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 66
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 64