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Name : SCD_n02686 (SCD_n02686) Accession : YP_008547518.1 Strain : Sulfuricella denitrificans skB26 Genome accession: NC_022357 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 2730685 - 2732391 bp Length : 1707 bp Strand : - Note : K02454 DNA sequence : ATGCCAAGGCCGGAAAAAGTCCGCCTGGGTGAAATCCTGGTGCAGCAGAAACTGATTTCGCAAGTGCAGCTCGACGCTGC GCTCGATCAGCAAAAGCGTTCCGGGCGCAGGCTTGGGCGTGTTTTCATCGAAAACGGCTACGTCACGGAAGAGCAGATTT CCGAAGCGCTGGCGAAGCAGCTCAATATCCCCCATATCAACCTCAAATATTATAACGTTAATCTGGAGGCGGTCGGGTTT CTGCCGGAGACCCAGGCAAGAAGATTCCGTGCCATCGTCCTGGAGCAGCGCGGCGACAACAGCCTACTGATAGGCATGGC GGATCCCAGCGATTTGTTCGCTTACGATGAGATTGCCCGGTTGGTGAAGAATGACATCGAGCTGGCAGTGGTGAACGAAG AACTGCTGCTGCAAACCATCGACCGGCTGTATCGCCGCACCGAGGAAATCACCGGTCTGGCACGCGAACTGGAGCAGGAC CTGGGCGATGTGAGCGTAGACTTCGGCGCTCTGGGCGTGATCGCCGGCCAGGAAGACGCGCCGGTGGTGAAGCTGCTGCA GTCGGTATTTGACGATGCCACCCAGGTGCGCGCTTCGGACATCCATATCGAGCCGCAGGAAAGCAAGCTGCAAATTCGTT TCCGCATAGACGGTGTGCTGCACCTGCAAACCGAGGCCGACATCAAGATCGCCTCGGCTCTCGCGCTACGTATCAAGCTC ATGTCGGGCCTGGATATTTCTGAAAAACGCTTGCCTCAGGATGGTCGCTTTGCGATTAAGGTCAAGCAGCAACAAATTGA TGTGCGCCTTTCAACCATGCCTACCCAGTATGGCGAGTCCGTGGTGATGCGTCTTCTCAACCAGAGCGGCGGCATGCTAG CGCTGGATCACCTCGGCATGCCGGTCGGGATGCTGGAAAGATTCCGCAGCATCATTCGTCGTCCCAACGGTTTGGTGCTG GTCACCGGCCCTACCGGTAGCGGCAAAACCACCACGCTGTACGGTGCTCTGGCTGAACTGAATTCGCTGGAAAGAAAGCT GATCACCGTGGAAGACCCGGTGGAATATCGTCTACCAGGGATCAACCAGATCCAGGTCAACGAAAAAATAGACCTGACTT TTTCCCGTGTCCTGCGCTCGACCTTGCGTCAAGACCCGGATGTCATCCTGGTGGGCGAGATGCGCGATCAGGAAACCGCT CAAATCGGTTTGCGCGCGGCCATGACCGGTCACCTCGTGCTATCCACACTGCATACCAACGATGCCGAAAGCACACCGGT CCGGTTGCTCGACATGGGGGTGCCGCGCTATATGGTGGCGACTTCATTGCAAGTCGTGCTGGCACAGCGCCTGGTTCGTG TGATCTGCGAGAGCTGCACTAAACCTTACGCACTCAGGCCCAATGAGCATGAGTTTCTGAAGTTTGAATTGGGTGAAGGG GTGGATCAGCATGCCTACATGCATGGCCGCGGTTGCTCGCGCTGCAATGGCACCGGTTACCAGGGGCGGGTCGGTGTATA TGAAATGCTGGAAATGAGTGAACCCCTTGTTGACGCGATCAGTCACCATGATCCGGGGCAATTCGTCAAATCAGCCCGCC AGCAGATGGCGGGTGAAACGCTTCGGAGGCATGCCGTGGCTCTGGTCATTGCAGGCAAAACCTCGGTGGCCGAGGCGATG CGCATCAGCAATCAGTTCGAGGATTAA Protein sequence : MPRPEKVRLGEILVQQKLISQVQLDAALDQQKRSGRRLGRVFIENGYVTEEQISEALAKQLNIPHINLKYYNVNLEAVGF LPETQARRFRAIVLEQRGDNSLLIGMADPSDLFAYDEIARLVKNDIELAVVNEELLLQTIDRLYRRTEEITGLARELEQD LGDVSVDFGALGVIAGQEDAPVVKLLQSVFDDATQVRASDIHIEPQESKLQIRFRIDGVLHLQTEADIKIASALALRIKL MSGLDISEKRLPQDGRFAIKVKQQQIDVRLSTMPTQYGESVVMRLLNQSGGMLALDHLGMPVGMLERFRSIIRRPNGLVL VTGPTGSGKTTTLYGALAELNSLERKLITVEDPVEYRLPGINQIQVNEKIDLTFSRVLRSTLRQDPDVILVGEMRDQETA QIGLRAAMTGHLVLSTLHTNDAESTPVRLLDMGVPRYMVATSLQVVLAQRLVRVICESCTKPYALRPNEHEFLKFELGEG VDQHAYMHGRGCSRCNGTGYQGRVGVYEMLEMSEPLVDAISHHDPGQFVKSARQQMAGETLRRHAVALVIAGKTSVAEAM RISNQFED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-81 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-81 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SCD_n02686 | YP_008547518.1 | general secretion pathway protein E | VFG1876 | Protein | 1e-87 | 43 |
| SCD_n02686 | YP_008547518.1 | general secretion pathway protein E | VFG2048 | Protein | 2e-80 | 42 |
| SCD_n02686 | YP_008547518.1 | general secretion pathway protein E | VFG0182 | Protein | 5e-84 | 42 |
