Gene Information

Name : murD (SCD_n02487)
Accession : YP_008547326.1
Strain : Sulfuricella denitrificans skB26
Genome accession: NC_022357
Putative virulence/resistance : Unknown
Product : UDP-N-acetylmuramoylalanine--D-glutamate ligase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2544050 - 2545438 bp
Length : 1389 bp
Strand : -
Note : K01925

DNA sequence :
ATGAGATTGAACCTCGAACATAAAAAAGTGCTGGTGGTGGGGCTGGGCGTCACCGGCCTTTCCATGGCGCGCTGGCTGGA
CGCGAGAGGCGCGGTGGTGGCTGTCACCGACTCGCGCGACAACCCGCCGCACGCCGCACGCCTTCAGGCTGAGCTACCTG
GCGTGCCGCTATTCACCGGCAAGCTCAGGGAAGAGGTGTTTCGCAATGCCGATCTGCTCGCGGTCAGTCCGGGCGTTTCC
CTGCGTGAACCGGCCGTTGCCGACGCGCTGGCGCACGGCGTGGCAGTGGTCGGGGATATCGAGCTGTTCGCCCAGGCGCT
CTGCACTCAGGATTTGACGTTCAGGACCCAGGTGATTGCCATTACCGGCTCCAACGGCAAGAGCACGGTGACCGAGATGG
TCGGTGCGATGTGCAGGAAGGCTGGCCTGCATACCGTGGTGGCGGGAAATATTGGTCTGCCGGTGCTGGATGCATTGAGC
GATCTGGATCAGCGCGGCGAGACTGCTGACGTGTTCGTAATCGAACTCTCCAGTTTTCAGCTGGAAACCACGCACACACT
GAACCCGGCGGCAGCGACCGTACTTAATGTGACCGAAGACCACATGGACCGCTACCATGGCATGGAGGATTACGCCGCGG
CCAAAAAGCGCATTTTTGCCGGTAACGGCGTCCAGGTGCTGAACCGGGAAGACCACTACAGCCTGGCAATGGCGAAGTCC
GATCGCAAAGTGATGACGTTTGGCCTGGATGAGCCACAAAACCCCGATGACTGGGGATTGCTGGGTAGCGATAACAGCCA
GTGGCTGTCACAAGGTGAGAATCGGTTGATGCAAATCGCCGATCTGCCGCTTGCCGGCTTGCACAACGCCGCCAATGCGC
TTGCTGCTCTGGCCTTGTGCCGCGCCATCGATCTGCCGTTTCCACCCCTGATTGAAGCGCTGCGCGAGTTCAAGGGTCTG
TCTCACCGGGTGGAGAAAGTGGCGGAGATTAATGGCATTATTTTCTACGACGATTCCAAGGGAACCAACGTAGGCGCCAC
GGTAGCTGCACTCAACGGCATGTCGTGCAAAGTGGTGCTGATTGCCGGTGGCGATGGCAAAGGCCAGGATTTCAGCCCGC
TGGCACCGGCAGTGTCTGCCCATGCCCGTGCTGTCGTGCTGATTGGCCGTGACGGGCAGAGAATCGGAGCGGCCCTGACT
GGCTGTGGTGTGCCACTGATCTATGCGGCGAGCCTGGAGAAGGCGGTAACCCTGGGATTCGAGCAGGCCCATCCGGGTGA
CGCGGTGCTGCTGTCGCCGGCCTGCGCCAGCTTCGATATGTTCCGCAACTACGAACATCGCGCCCAGGTATTTGTCGCAG
CAGTCAAGGAACTGGAGGGGGCGGTATGA

Protein sequence :
MRLNLEHKKVLVVGLGVTGLSMARWLDARGAVVAVTDSRDNPPHAARLQAELPGVPLFTGKLREEVFRNADLLAVSPGVS
LREPAVADALAHGVAVVGDIELFAQALCTQDLTFRTQVIAITGSNGKSTVTEMVGAMCRKAGLHTVVAGNIGLPVLDALS
DLDQRGETADVFVIELSSFQLETTHTLNPAAATVLNVTEDHMDRYHGMEDYAAAKKRIFAGNGVQVLNREDHYSLAMAKS
DRKVMTFGLDEPQNPDDWGLLGSDNSQWLSQGENRLMQIADLPLAGLHNAANALAALALCRAIDLPFPPLIEALREFKGL
SHRVEKVAEINGIIFYDDSKGTNVGATVAALNGMSCKVVLIAGGDGKGQDFSPLAPAVSAHARAVVLIGRDGQRIGAALT
GCGVPLIYAASLEKAVTLGFEQAHPGDAVLLSPACASFDMFRNYEHRAQVFVAAVKELEGAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00311 YP_008207776.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR25 Protein 1e-65 45
BJAB0868_00315 YP_008211641.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR26 Protein 1e-65 45