Gene Information

Name : SCD_n02406 (SCD_n02406)
Accession : YP_008547246.1
Strain : Sulfuricella denitrificans skB26
Genome accession: NC_022357
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2448830 - 2449525 bp
Length : 696 bp
Strand : -
Note : K02003

DNA sequence : 
ATGGCCGATCCGCTGATCCGCGTCGAAGGCCTGCACAAACAATACGAAATCAAGGGCGGCCGTGCTGTTCCGGTACTGCA
CGACGTGAATTTGAGTATCGCCCCCGGCGAATTCGTCGCCATCATGGGCCCATCCGGTTCTGGCAAGTCCACCTTCATGA
ATATCCTCGGCTGCCTCGACACGCCCACCAGCGGGCATTATTTCCTGAATGGCCGGGATGTCGCAAAGTTGAATCCGGAT
GAACTCGCTCATCTTCGAAACAGCCTGATTGGATTTGTGTTCCAGGGTTTTAACTTGTTAAAGCGCGTCACCGCACTGGA
CAACGTCGCGCTACCACTGCTTTACGCCGGCCAGGGGCAAGCGGAGCGGCGTGAACGTGCCCTGGAAACGCTGCGCCAGA
CCGGCCTGGAAAAGTTTACCCTGTCGCTGCCCAATCAGCTTTCCGGCGGCCAACAGCAGCGCGTCGCCATCGCCCGTGCG
TTGATCAACCACCCGCCATTGATTCTGGCCGACGAACCGACCGGCAACCTGGATACCCACACCAGCCAGGAGATCATGGA
GATATTCACCCGCCTCAACCGCGAACAGGGCATGACCGTCATCCTGGTAACCCACGAGCCGGATATCGCCCGCTATGCTC
ACCGGATGGTGCGCTTCGTGGATGGGCGGGTGGAACAGGATGGTGAGGTGTCATGA

Protein sequence : 
MADPLIRVEGLHKQYEIKGGRAVPVLHDVNLSIAPGEFVAIMGPSGSGKSTFMNILGCLDTPTSGHYFLNGRDVAKLNPD
ELAHLRNSLIGFVFQGFNLLKRVTALDNVALPLLYAGQGQAERRERALETLRQTGLEKFTLSLPNQLSGGQQQRVAIARA
LINHPPLILADEPTGNLDTHTSQEIMEIFTRLNREQGMTVILVTHEPDIARYAHRMVRFVDGRVEQDGEVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 7e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCD_n02406 YP_008547246.1 ABC transporter NC_012469.1.7686878. Protein 2e-49 54
SCD_n02406 YP_008547246.1 ABC transporter NC_008702.1.4606598. Protein 1e-40 52
SCD_n02406 YP_008547246.1 ABC transporter CP001581.1.gene798.p Protein 9e-34 44