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Name : dnaB (SCD_n01787) Accession : YP_008546631.1 Strain : Sulfuricella denitrificans skB26 Genome accession: NC_022357 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : - COG ID : - EC number : - Position : 1810295 - 1811668 bp Length : 1374 bp Strand : - Note : K02314 DNA sequence : ATGAATGATCAAGAGCTGGATAATCTGAAGCTGCCGCCCCATTCTGTTGAGGCAGAGCAGTCCGTGCTGGGCGGCCTGTT GCTCGACAACAGCGCGTGGGAAAAGATTGCCGACCTGGTCACCGAAGGGGATTTTTATCGCCACGACCACCGCCTGATTT ACCGCCATATCAGCAAGCTGGTGGAACACAACAAGCCGGCGGACGTTATCACTATCGCGGAATCGCTGGAGAACAGCGCC AAGCTGGTCGATGCGGGCGGTTTGGCCTATCTGGGGGCGCTGGCGCAGAATACGCCGAGCGCAGCCAATATCCGCCGCTA TGCGGAGATTGTTCGGGAGCGTGCGGTACTCAGAAAACTGGTCGAAGTCGGCAGCGGCATTGCCGAGGATGCGCTTAGTC CCGCCGGTCGCTCGATGGCACAATTGCTGGATGAGGCTGAAGCGAAAGTGTTCGAGATTGCCGAGGCGGGCTCGAAGGGC AAGCAAGGTTTTGTCGAGATTCAGCCGTTATTGACCCAGGTTGTAGAACGCATCGACATGCTTTTTCAGCGTGATAATGC GAGTGATATCACCGGAATACCTACCGGTTTTTCTGACCTCGATGAGAAAACATCCGGCTTGCATGGGGGTGACTTGATTA TCGTCGCGGGTCGGCCGAGTATGGGCAAAACCGCATTCTCTCTGAATATTGCGGAAAATGTGGCGATACAAACCGGAATG CCGGTCGCGGTCTTCAGTATGGAAATGGGCGGGTCGCAACTGGTGACGCGGATGATCGGTTCGATTGGTCGTCTTGATCA ACATCGGATACGTACTGGCCGTTTGCTGGACGAAGATTGGCAAAAACTCACTTATGCAGTGGGCAAGCTGAACGATGCCC CGATTTATATCGATGAGAGTGCGGCGCTGACTTCGATGGATTTGCGAGCGAGAGCGCGTCGTTTACATCGTCAATGCGGC AAACTCGGCCTGATCGTGATCGATTACCTGCAACTCATGAGCGGAAGCGGCAAGGGTGGGGGCAACGAAAATCGAGCCAC CGAAATTTCAGAAATTTCACGTGGCCTCAAGTCTTTGGCCAAGGAATTAGATGTGCCGGTGATCGCCCTTTCCCAGCTCA ACCGTAGTCTGGAGAATCGCCCCAATAAACGTCCGGTGATGTCGGATCTGCGCGAATCAGGTGCTATCGAGCAGGATGCT GATATCATTTTGTTTATTTACCGTGATGAGGTTTATAACACCGACACACCAGACAAAGGCATCGCCGAGATTATCATCGG CAAGCAGCGTAACGGCCCGATCGGCACGGTGCGCATGACCTTCCTAGGTGAATACACCCGATTTGAGAATTATGCTCATG GGGGGAGTTATTAG Protein sequence : MNDQELDNLKLPPHSVEAEQSVLGGLLLDNSAWEKIADLVTEGDFYRHDHRLIYRHISKLVEHNKPADVITIAESLENSA KLVDAGGLAYLGALAQNTPSAANIRRYAEIVRERAVLRKLVEVGSGIAEDALSPAGRSMAQLLDEAEAKVFEIAEAGSKG KQGFVEIQPLLTQVVERIDMLFQRDNASDITGIPTGFSDLDEKTSGLHGGDLIIVAGRPSMGKTAFSLNIAENVAIQTGM PVAVFSMEMGGSQLVTRMIGSIGRLDQHRIRTGRLLDEDWQKLTYAVGKLNDAPIYIDESAALTSMDLRARARRLHRQCG KLGLIVIDYLQLMSGSGKGGGNENRATEISEISRGLKSLAKELDVPVIALSQLNRSLENRPNKRPVMSDLRESGAIEQDA DIILFIYRDEVYNTDTPDKGIAEIIIGKQRNGPIGTVRMTFLGEYTRFENYAHGGSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 9e-100 | 52 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 2e-86 | 48 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-87 | 47 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-85 | 47 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-85 | 47 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 5e-87 | 47 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 1e-87 | 47 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 3e-86 | 45 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 1e-71 | 44 |
