Gene Information

Name : SCD_n01576 (SCD_n01576)
Accession : YP_008546429.1
Strain : Sulfuricella denitrificans skB26
Genome accession: NC_022357
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1590290 - 1590955 bp
Length : 666 bp
Strand : -
Note : K02003

DNA sequence : 
GTGCAGGCAATTGCGCTAACCAAGCAAGTGACCAGCGAGGGCGCGCCGTTAATTATCCTCGATCAGCTTGATTTCTCGGC
ATCGCCGGGCGAATCGGTTGCTGTGCTGGGTGCTTCCGGTTCGGGAAAATCCACCCTGCTCGGCTTGCTGGCGGGCCTGG
ATATGCCCACCGGCGGCAAGGTTTTGCTTGAGGGCACCGATCTGTTTGCACTCGATGAGGATGGACGGGCAGCCTTGCGC
GGACGCCTCGTTGGATTTGTATTCCAGTCGTTTCAACTCCTGCCGGCGCTGACTGCGCTGGAAAACGTGATGCTGCCACT
GGAACTTGCCGGGGTGAATGGCGCTCGCATTGAGGCGGGTGCTGCGCTGAAGCGGGTAGGGCTGGCGCAGAGGGCTTCCC
ATTATCCGCGCCAGCTCTCTGGCGGCGAGCAGCAGCGCGTGGCAATTGCCCGTGCTTTTTCTGTCAACCCGCGCCTGTTG
CTGGCCGATGAGCCGACAGGCAACCTCGACAGTGCGACTGGCGAACGCATCATTGACCTGCTATTTCAGCTGAACGAGGA
ACACGGCACCACGCTAATCCTGGTGACCCACGACGATAGTCTGGCGCAACGCTGTAAGCGACGTCTGCACCTTGATAGAG
GTGTTCTAGTTCAGGAACTTGCATGA

Protein sequence : 
MQAIALTKQVTSEGAPLIILDQLDFSASPGESVAVLGASGSGKSTLLGLLAGLDMPTGGKVLLEGTDLFALDEDGRAALR
GRLVGFVFQSFQLLPALTALENVMLPLELAGVNGARIEAGAALKRVGLAQRASHYPRQLSGGEQQRVAIARAFSVNPRLL
LADEPTGNLDSATGERIIDLLFQLNEEHGTTLILVTHDDSLAQRCKRRLHLDRGVLVQELA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-23 45
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 3e-13 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SCD_n01576 YP_008546429.1 ABC transporter-like protein NC_008702.1.4606598. Protein 3e-32 54
SCD_n01576 YP_008546429.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-29 47