Gene Information

Name : arsB (SCD_n01458)
Accession : YP_008546313.1
Strain : Sulfuricella denitrificans skB26
Genome accession: NC_022357
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1465818 - 1467167 bp
Length : 1350 bp
Strand : +
Note : K03893

DNA sequence :
ATGGTAGAATTGGGCTATTTGCGTCCAAGACTGGAAATGTTCACCGCCATCCTGATTTTTGCTGCCACCCTAGCCTTGGT
GGTCTGGAAGCCGAGAGACCTCGGCATTGGCTGGAGCGCCCTGCTCGGAGCGGTGGTTGCGCTGGCAGCCGGCGTAATTT
CGCTCGCCGATGTGCCGGTAGTGTGGGGCATCGTGTGGGATGCCACTTTTACTTTCATTGCTCTGATCGTCATTTCCCTG
ATCCTCGATGCCGCCGGGTTTTTCGAGTGGGCGGCGCTGCATGTGGCGCGCTGGGGCAGGGGTTACGGCCATTGGCTGTT
TCTGCTGATCGTGCTGCTGACGGCGGTGGTGGCGGCGATTTTCGCCAACGATGGCGCAGTGCTGATCCTGACGCCGCTGG
TGCTGGAGATGCTGCACGCACTGCGCTTTCGGCCTGCCGCCGCGCTCGCTTTCGTTTTCGCGGTCGGCTTCATGGCAGAT
GCGGCGAGCCTGCCGCTGATGATCTCCAACCTCACCAACATCATTGTCGCCAACTATTTTGGCATTTCCTTCGCCGATTA
CGCGGCGGTGATGGCGCCGGTGAACGTGCTGGCGGTTCTGGCCTCGCTGGCCGTGCTGTGGCTGTTCTTCCGCAAGGATC
TGCCGCCGCGCTTCGAAGTCTCGGCTTTACCGGACCCGGCCTCGGGTATCCACGACATTTTTGTTTTCAAGGCAGGCTGG
GTGGTGCTGGCATTGCTGATGGCGGGCTATTTCGCCGCCCGTCCTCTTGGTCTGCCGGTCTCGGTCGTGGCCGGGGCTGC
AGCCCTGCTGCTGGTGCTGGCGGCGCTGCGCGAACATTTTATCCGCAAGCAGCCCAACTCAGTCATCCCGGTGTTGACCC
TGCTGCGTGAGGCGCCCTGGCAGATCGTGCTGTTTTCGCTGGGCATGTATCTGGTGGTGTTCGGCTTGCGCAATCAGGGG
TTCACCGCCGAACTGGGGGGTATTCTGGAATGGCTGGATGGCCAGGGATTCTGGGCAGCCACTCTGGGTGCGGGATTCCT
GTTTGCCTTGCTGTCGGCCGTGATGAACAACCTGCCGACGGTGATGGTGGCCAGCCTGGCTATCCACGACACCCATCTTT
CCGCACTGACGCGGGAGGCAATGATCTACGCTAACGTGATCGGCTGCAATCTGGGGCCGAAGATGACGCCGTTGGGCAGC
CTGGCCACCCTGTTGTGGCTGCACGTGCTGGAAACTCGCGGTATCCGGATAGGCTGGGGCCAGTATTGCCGCGTTGGGGT
CGTGTTGACGCTGCCTGTATTGCTCGTCACTTTGCTCGGACTAACAGCTTGGCTTATGATGCTGCGATGA

Protein sequence :
MVELGYLRPRLEMFTAILIFAATLALVVWKPRDLGIGWSALLGAVVALAAGVISLADVPVVWGIVWDATFTFIALIVISL
ILDAAGFFEWAALHVARWGRGYGHWLFLLIVLLTAVVAAIFANDGAVLILTPLVLEMLHALRFRPAAALAFVFAVGFMAD
AASLPLMISNLTNIIVANYFGISFADYAAVMAPVNVLAVLASLAVLWLFFRKDLPPRFEVSALPDPASGIHDIFVFKAGW
VVLALLMAGYFAARPLGLPVSVVAGAAALLLVLAALREHFIRKQPNSVIPVLTLLREAPWQIVLFSLGMYLVVFGLRNQG
FTAELGGILEWLDGQGFWAATLGAGFLFALLSAVMNNLPTVMVASLAIHDTHLSALTREAMIYANVIGCNLGPKMTPLGS
LATLLWLHVLETRGIRIGWGQYCRVGVVLTLPVLLVTLLGLTAWLMMLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 4e-73 58
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-63 49
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 3e-63 49
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 8e-64 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB YP_008546313.1 arsenical pump membrane protein BAC0577 Protein 3e-73 58
arsB YP_008546313.1 arsenical pump membrane protein BAC0578 Protein 2e-75 58
arsB YP_008546313.1 arsenical pump membrane protein BAC0031 Protein 1e-68 58
arsB YP_008546313.1 arsenical pump membrane protein BAC0576 Protein 9e-75 58
arsB YP_008546313.1 arsenical pump membrane protein BAC0574 Protein 3e-63 49
arsB YP_008546313.1 arsenical pump membrane protein BAC0575 Protein 1e-62 49