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Name : SCD_n01315 (SCD_n01315) Accession : YP_008546174.1 Strain : Sulfuricella denitrificans skB26 Genome accession: NC_022357 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 1329027 - 1330538 bp Length : 1512 bp Strand : + Note : K02454 DNA sequence : ATGCCCAATCAAAAACTTTCCACTCCCGATCCCAAGATCACGCAGCTTCTGCCTTACCATGTCGCCAAAAGCAAGGGCGT GATCGCGGTGCGCCAGCTTGGTATCGAGATCGAGGTCTGGGTGCGCGATGGCTTGCAGGCAGAAACCCTGGCCGAGACCC GCAGAACTCTAGGACGGCCGTTGCATACGGTGGTGCTTGAACCGGCCGTTTTCGAGCAGTGCCTTGCCCAGGTTTATGCA CGCGCGGACGATCACGCTGCGCGCCTGATGGACGATATGGAACAGGATCTTGACTTGCAGCAGCTGACTCAGGACCTTCC TGTGATCGGCGATTTGCTGGATGTCGAAGATGATGCCCCGATCATTCGCCTGATCAACGCGCTGTTGACACAAGCCTTGC GCGAGAAGGCCTCGGACATTCATATCGAGCCCTATGAAACGCGTTCGGTCGTGCGTTTTCGCGTTGACGGCCAGTTGCGC GACGTGATCGAACCGCAGCGCTCCCTGCATGCAGCCGTAGTATCGCGGATCAAGGTGATGGCGCAACTGGATATCGCGGA AAAGCGTTTGCCGCAGGATGGCCGAATTACTCTGCGCATCGCGGGCCGCCCCGTGGATGTGCGCGTGTCCACCTTGCCTA CGGGGCATGGCGAGCGCGTAGTATTGCGCCTGCTGGACAAGCAGCATGGGCGTCTCGATCTGGATGGTCTGGGCATGGGT GCCGCAACCATGGTTGGCCTGGACAGCCTGATCCATCAGCAGCATGGCATCGTGCTGGTGACGGGGCCGACCGGATCGGG CAAGACGACGACGCTGTATGCCGCGCTGTCGCGCCTGGATGCGGCCACCCGCAACATCATGACTGTCGAAGACCCGATTG AATACGACCTGGACGGCATCGGGCAGACCCAGGTCAATGCGCGCATCGACATGACTTTTGCCCGAGCTTTGCGCGCGATT CTGCGCCAGGACCCGGATGTGATCATGATCGGTGAAATCCGCGATCTGGAAACCGCGCAGATCGCCGTTCAAGCCAGCCT TACTGGTCATCTGGTGCTGGCCACGCTGCACACCAATGATGCGGCCGGTGCGGTGACGCGCCTGATCGATATGGGCGTGG AGCCTTTCCTGCTGGCTTCTAGTTTGCTGGGTGTGCTGGCGCAGCGGTTGGTGCGGCATACCTGCCCGGATTGCCGCAGA TCCTATGCGCCGGATGCGACCGAGCTGGCCGTGCTGAATTTGCCGCATCCTCCCCAGACCCTTTATGCGGCCACCGGCTG TACTAGCTGCAATATGACCGGCTACCGGGGGCGCACAGGTATTTATGAGTTGCTGTCCGTGGATGCGAACTTGCGCCGCA TGATTCATGATGGTGGATCCGAGCAGTCCTTGCGCGATTACGCAATGGGCGCGGGTTTGATTGACTTGCGGCAGGATGGG ATGCGCTGGGTGGCGAGCGGCGATACTACACTGGAAGAAGTGCTGCGCGTGGCGAGAGATGTCCGGATTTAA Protein sequence : MPNQKLSTPDPKITQLLPYHVAKSKGVIAVRQLGIEIEVWVRDGLQAETLAETRRTLGRPLHTVVLEPAVFEQCLAQVYA RADDHAARLMDDMEQDLDLQQLTQDLPVIGDLLDVEDDAPIIRLINALLTQALREKASDIHIEPYETRSVVRFRVDGQLR DVIEPQRSLHAAVVSRIKVMAQLDIAEKRLPQDGRITLRIAGRPVDVRVSTLPTGHGERVVLRLLDKQHGRLDLDGLGMG AATMVGLDSLIHQQHGIVLVTGPTGSGKTTTLYAALSRLDAATRNIMTVEDPIEYDLDGIGQTQVNARIDMTFARALRAI LRQDPDVIMIGEIRDLETAQIAVQASLTGHLVLATLHTNDAAGAVTRLIDMGVEPFLLASSLLGVLAQRLVRHTCPDCRR SYAPDATELAVLNLPHPPQTLYAATGCTSCNMTGYRGRTGIYELLSVDANLRRMIHDGGSEQSLRDYAMGAGLIDLRQDG MRWVASGDTTLEEVLRVARDVRI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-115 | 55 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-115 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SCD_n01315 | YP_008546174.1 | general secretory pathway protein E | VFG0182 | Protein | 2e-128 | 59 |
| SCD_n01315 | YP_008546174.1 | general secretory pathway protein E | VFG1876 | Protein | 2e-120 | 55 |
| SCD_n01315 | YP_008546174.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-115 | 54 |
| SCD_n01315 | YP_008546174.1 | general secretory pathway protein E | VFG2426 | Protein | 9e-81 | 48 |
