Gene Information

Name : smpB (SCD_n01275)
Accession : YP_008546136.1
Strain : Sulfuricella denitrificans skB26
Genome accession: NC_022357
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1287660 - 1288103 bp
Length : 444 bp
Strand : -
Note : K03664

DNA sequence :
ATGAGCATCGCGCAAAACAAAAAAGCTTTCCACGACTTCTTCATCGAGGAAAAGTATGAAGCAGGCATCGTACTTGACGG
CTGGGAGGTCAAGGCCATCCGCGCCGGGCGGACACAGCTCAAGGAAGCCTACGTCATCATCCGCAGTGGCGAGCTCTATC
TGCTCGGCTGCCATATCAGTCCGCTGCCGACCGCCTCCACCCACGTCAACCCCGACCCAGTGCGCACCCGAAAACTGCTG
CTGCATGCCGAGGAAATCAGCAAGCTGATCGGCAAGGTGGAACGCGCCGGTTTTACTCTCGTGCCGCTGGACATGCATTT
CGTCCGTGGCCGGATCAAGCTGGAAATCGGCCTGGCCAAGGGCAAAAAGCAGCATGACAAGCGCGATGCCGAAAAGGAAA
AAGACTGGCAGCGCGAGAAGCAGCGCCTGTTGCGGAACAAATAA

Protein sequence :
MSIAQNKKAFHDFFIEEKYEAGIVLDGWEVKAIRAGRTQLKEAYVIIRSGELYLLGCHISPLPTASTHVNPDPVRTRKLL
LHAEEISKLIGKVERAGFTLVPLDMHFVRGRIKLEIGLAKGKKQHDKRDAEKEKDWQREKQRLLRNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 9e-36 50
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 2e-20 48
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 8e-25 45