Gene Information

Name : SCD_n01127 (SCD_n01127)
Accession : YP_008545993.1
Strain : Sulfuricella denitrificans skB26
Genome accession: NC_022357
Putative virulence/resistance : Unknown
Product : class I and II aminotransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.6.1.-
Position : 1134736 - 1135962 bp
Length : 1227 bp
Strand : +
Note : K14260

DNA sequence :
ATGCAACCCGTACTCAAATCCAGCAAGCTCGCCAACGTCTGCTACGACATCCGTGGACCGGTGATGGCGCGTGCCCGGCA
GATGGAGGAGGACGGGCATCGCATTATCAAACTCAACATCGGCAATACGGCACCGTTCGGTTTTGAAGTGCCGGAGGAAA
TCCTGCAGGATGTGATCCATAATCTGCCCAATGCCTCCGGGTATTGCGAATCCAAAGGGCTGTTCGCCGCGCGCAAGGCG
ATCATGCACTACACCCAGGAAAAGAAAATCGCCGATGTGACGATGGAGGATATCTACATCGGCAACGGCGTGTCCGAGCT
GATCGTGATGGCGATGCAGGGTTTGCTGAACACTGGAGATGAAGTACTGGTGCCGATGCCTGACTATCCGCTGTGGACAG
CGGCGGTAACACTGGCCGGCGGCACGCCCCACCATTACATCTGCGACGAGCAGTCTGGCTGGCTGCCAGATCTGAACGAT
ATTCGCGGCAAAATCGGGCCAAATACCCGTGCGATTGTTCTGATCAACCCGAATAATCCGACCGGTGCGCTTTATCCGGT
TGAACTGCTGCGAGAGGTCGTGGAGATCGCGCGACAACACCAGCTGATCATCTACTCCGACGAGATCTACGACAAGGTCT
TGTATGACGGTGCGACCCATACCTCGATTGCGTCTCTGGCAGACGACGTGCTGTTCATTACCTTCAACGGACTTTCCAAG
AATTACCGTGCAGCCGGTTATCGTGCGGGATGGCTGGTGGTGTCGGGCGAAAAAAAGCATGCCAGAGATTACATTGAAGG
CTTAACCATGCTCGCCTCGATGCGATTGTGTTCCAACGTGCCGGCGCAGTACGGAATACAGACTGCACTTGGCGGCTACC
AGAGCATCAATGATCTGGTCGCGCCCGGGGGGCGTCTGACCAAGCAACGCGACCTGGCCTATCAGTTGCTCACCGATATT
CCCGGTGTAACCTGCGTCAAGCCGCAGGGCGCCATGTATTTGTTCCCCCGGCTTGATGCCAAGATGTACCCGATTGCCGA
TGACCAGGAATTCATCCTTGAGTTGCTGCTTGAGGAAAAGGTGTTGCTGGTGCAGGGCAGCGGTTTCAACTGGCCAAACC
CCGATCATTTCCGGGTGGTGTTCCTGCCCAACGTAGACGACCTCACCGAGGCCATAGGTCGTATTGCACACTTTCTTGAG
CACTATCGCAAGCGGCATGGTTCCTAA

Protein sequence :
MQPVLKSSKLANVCYDIRGPVMARARQMEEDGHRIIKLNIGNTAPFGFEVPEEILQDVIHNLPNASGYCESKGLFAARKA
IMHYTQEKKIADVTMEDIYIGNGVSELIVMAMQGLLNTGDEVLVPMPDYPLWTAAVTLAGGTPHHYICDEQSGWLPDLND
IRGKIGPNTRAIVLINPNNPTGALYPVELLREVVEIARQHQLIIYSDEIYDKVLYDGATHTSIASLADDVLFITFNGLSK
NYRAAGYRAGWLVVSGEKKHARDYIEGLTMLASMRLCSNVPAQYGIQTALGGYQSINDLVAPGGRLTKQRDLAYQLLTDI
PGVTCVKPQGAMYLFPRLDAKMYPIADDQEFILELLLEEKVLLVQGSGFNWPNPDHFRVVFLPNVDDLTEAIGRIAHFLE
HYRKRHGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-114 58
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-114 58
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 5e-114 58
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 5e-114 58