Gene Information

Name : HifGL_001690 (HifGL_001690)
Accession : YP_008544773.1
Strain : Haemophilus influenzae KR494
Genome accession: NC_022356
Putative virulence/resistance : Virulence
Product : putative ABC-type chelated iron transport system permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1752643 - 1753491 bp
Length : 849 bp
Strand : -
Note : inorganic ion transport and metabolism

DNA sequence : 
ATGTTAGATTTATTGCTCGAACCTTTTTCCTATGATTATATGCTCAAGGCGATGATTTTGAGTACCGCAGTGGGTGGCAT
TTGTGCTTTTTTGTCTTCATATTTAATGCTTAAAGGCTGGTCTTTGATTGGCGATGCGCTTTCTCATTCCGTTGTGCCTG
GTGTTGCAATTGCCTATGCTTTTGCGTTGCCTTATGCACTTGGTGCATTTTTTGCAGGTATTTTTGCCGCACTTTCTATT
CTTTGGATTAAATCCATTTCTAAACTGAAAGAAGATGCCATTATCGGGTTTATTTTCAGTACTTTCTTTGCATTAGGTCT
ATTGCTCATTTCTTTAAATCCAACCGCAGTAAATGTGCACAATATCATTTTAGGTAATATTTTAGGCATTGCTGATGAAG
ATATTTACCAAGTCGCAATTATTATCGGTGTTTGTTTAGTATTGCTTTTATTGTTCTGGAAAGACTTATTACTGATTTTT
TTCGATGAAACACAGGCAAGAACAGTAGGGCTTTCGCCATTATTTTATAAGGTTTTATTTTTTACTTTATTAAGTGCTTG
TGTGGTAGCTGCATTGCAAACTGTGGGGGCGATTTTAGTCATTGCAATGGTCATTACCCCTGGTGCAACAGCATATTTAC
TCACTGATAAATTCAAAACCTTGTCAATCATCGCTATTATTTTAGGCGCAGTGACAAATTTTGTTGGGGTCTATATTAGC
TATTATTTAGACGGTGCCACTGGCGGTGTGATTGTGACCTTGCAAACATTATTATTTTTAGTCGCTTTCTTATTTTCACC
AAAATATGGCTTACTCACACGTAATAAAAAGGCGGTAGAAAATGTTTGA

Protein sequence : 
MLDLLLEPFSYDYMLKAMILSTAVGGICAFLSSYLMLKGWSLIGDALSHSVVPGVAIAYAFALPYALGAFFAGIFAALSI
LWIKSISKLKEDAIIGFIFSTFFALGLLLISLNPTAVNVHNIILGNILGIADEDIYQVAIIIGVCLVLLLLFWKDLLLIF
FDETQARTVGLSPLFYKVLFFTLLSACVVAALQTVGAILVIAMVITPGATAYLLTDKFKTLSIIAIILGAVTNFVGVYIS
YYLDGATGGVIVTLQTLLFLVAFLFSPKYGLLTRNKKAVENV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-66 63
sitC NP_461784.1 permease Virulence SPI-1 Protein 1e-66 63
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-66 63
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-66 63
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-66 63
sitD NP_461785.1 permease Virulence SPI-1 Protein 7e-34 41
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 5e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HifGL_001690 YP_008544773.1 putative ABC-type chelated iron transport system permease component BAC0441 Protein 6e-71 70
HifGL_001690 YP_008544773.1 putative ABC-type chelated iron transport system permease component BAC0351 Protein 6e-67 63
HifGL_001690 YP_008544773.1 putative ABC-type chelated iron transport system permease component BAC0352 Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HifGL_001690 YP_008544773.1 putative ABC-type chelated iron transport system permease component VFG0527 Protein 6e-67 63
HifGL_001690 YP_008544773.1 putative ABC-type chelated iron transport system permease component VFG0528 Protein 3e-34 41