Gene Information

Name : HifGL_001689 (HifGL_001689)
Accession : YP_008544772.1
Strain : Haemophilus influenzae KR494
Genome accession: NC_022356
Putative virulence/resistance : Virulence
Product : ABC-type chelated iron transport system permease component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1751835 - 1752650 bp
Length : 816 bp
Strand : -
Note : inorganic ion transport and metabolism

DNA sequence : 
ATGTTTGATTGGCTTTTAGAACCGCTACAATTTGAGTTTATGCAAAATGCCTTATTGACTGCATTGATTGTTTCTATTAT
CTGTGCATTACTTTCTTGCTATTTAGTCTTGAAAGGTTGGTCATTAATGGGCGATGCAATTTCTCACGCTGTATTACCTG
GTATTGTACTCGCTTATTTGGCAGGAATTCCTTTAACGATTGGCGCATTTTTCTCAGGCATTTTTTGCTCCCTTGGCGTG
GGATATTTAAAAGAAAATAGTCGCATAAAAGAAGATACTGCAATGGGCATTGTATTTTCTGGAATGTTTGCCATTGGTTT
GGTTATGTTTACCAAAATTCAAACAGAACAGCATTTAACCCATATTTTGTTTGGTAATGTATTGGGTGTAAGTTATCAAG
AGCTTATTCAAAGTGCGGTCATTTCTGCGATAATTTTTTGTCTGATTGTCTTTAAACGTAAAGACTTTTTGCTTTATTGT
TTTGATCCAAGCCACACCCGTGTTGCAGGGCTTTCTCCTAAAATTTTACATTATGGTTTATTAATTCTACTTGCTTTAAC
CATTGTAAGCACGATGCAAGTGGTCGGCGTTATTTTGGTGGTGGCAATGTTAATTGCGCCAGGAATTACCGCACTTACGC
TCACAAAATCTTTTGATAAAATGCTATGGATTGCTATTGTCAGTTCCATTACATCAAGTCTAATTGGTGTAATATTGAGC
TATCATTTTGATGCCTCAACAGGTGCTTGTATCATTCTTCTGCAAGCCGCATTTTTTGTTATAGCATTAGCTTATAGCAA
GATTAGAACAATATGA

Protein sequence : 
MFDWLLEPLQFEFMQNALLTALIVSIICALLSCYLVLKGWSLMGDAISHAVLPGIVLAYLAGIPLTIGAFFSGIFCSLGV
GYLKENSRIKEDTAMGIVFSGMFAIGLVMFTKIQTEQHLTHILFGNVLGVSYQELIQSAVISAIIFCLIVFKRKDFLLYC
FDPSHTRVAGLSPKILHYGLLILLALTIVSTMQVVGVILVVAMLIAPGITALTLTKSFDKMLWIAIVSSITSSLIGVILS
YHFDASTGACIILLQAAFFVIALAYSKIRTI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-60 54
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-60 54
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-60 54
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-60 54
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-60 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HifGL_001689 YP_008544772.1 ABC-type chelated iron transport system permease component BAC0442 Protein 5e-74 62
HifGL_001689 YP_008544772.1 ABC-type chelated iron transport system permease component BAC0352 Protein 1e-60 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HifGL_001689 YP_008544772.1 ABC-type chelated iron transport system permease component VFG0528 Protein 1e-60 54