Gene Information

Name : cmgB11 (N755_01780)
Accession : YP_008543055.1
Strain :
Genome accession: NC_022354
Putative virulence/resistance : Virulence
Product : type IV secretion system protein VirB11
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 19921 - 20928 bp
Length : 1008 bp
Strand : -
Note : -

DNA sequence : 
ATGTCAATTACACTCGATAAATACACTCAAAAATATTTCGGAGAATTTTTAAAAGATGATTCTATCAATGAAATTTGTTA
TAATGGAGATGATAAAATTTGGATACAAAACTCCAAAGGATTATGGGAATCTGTAAAAACAGAACTTGATTTTGAGTCCG
CAGGACATTTTGCAACTGCTTCAGCCTCTTTTAAAAAAGACAAAATAGATGTATCACGCCCTATTCTTTCTTGTATTTTG
GTAGGCGGAGAGCGTATGCAAATTGTTATTCCGCCTGCTACCAAAAGCGAACATATTTCAATTACTATCAGAAAACCAAG
CAAAACTCGCTTTAAAATGGAAGATCATGTTAAAAGTGGACTTTTCGAAGATTTAAACCCTGATGATAAAAATATAATCA
AACCAAGCGATGAAGAATTAATCAAGTTATATAAAGAAAGAGATTATCAAGCTTTTATATCAAAAGCTGTTAGCTATGGT
AAAAATATCATCATCGCTGGTGAAACTGGCAGTGGTAAAACCACTTTTATGAAAACTCTTATTGATTTCATAAGCCTCGA
TGATCGGATCATAACAATAGAAGATGTTGAAGAAATCAAATTCTACGAACACAAAAATTTCGTGCAATTATTCTATCCGA
GTGAAGCAAAAAGCACAGATTTTTTAAATTCTGCAACGCTTTTAAAATCTTGTCTAAGAATGAAGCCTGACAGAATTTTA
CTTGCAGAGCTTAGAGGTGCGGAAACTTATGATTTTATCAATGTCTTAGCTAGTGGACATGGTGGAAGCATTACAAGTTG
TCATGCAGGAAGTCCTGAAGAAACATTCACACGACTTGCCTTAATGACTTTGCAAAACCCACAAGGTCAATGCGTTCCTT
TTGAAATTATCCAAAAAACACTTAAAGATTTAATTGATATTGTCGTGCATATCCACGCTCATCACGGAAAAAGGCGTATT
AGTGGCATTTATTTTAAAGAAATAGAGAATATCAAATTGGAGAGATAA

Protein sequence : 
MSITLDKYTQKYFGEFLKDDSINEICYNGDDKIWIQNSKGLWESVKTELDFESAGHFATASASFKKDKIDVSRPILSCIL
VGGERMQIVIPPATKSEHISITIRKPSKTRFKMEDHVKSGLFEDLNPDDKNIIKPSDEELIKLYKERDYQAFISKAVSYG
KNIIIAGETGSGKTTFMKTLIDFISLDDRIITIEDVEEIKFYEHKNFVQLFYPSEAKSTDFLNSATLLKSCLRMKPDRIL
LAELRGAETYDFINVLASGHGGSITSCHAGSPEETFTRLALMTLQNPQGQCVPFEIIQKTLKDLIDIVVHIHAHHGKRRI
SGIYFKEIENIKLER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11-2 YP_005777269.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-56 45
HP0525 BAD13913.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-56 45
virB11_1 NP_223192.1 cag island protein, DNA transfer protein Virulence cag PAI Protein 1e-55 45
virB11-2 YP_005774544.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-56 45
HP0525 BAD13886.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-56 44
HP0525 BAD14024.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-55 44
HP0525 BAD13996.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-55 44
cag-alfa AAF80196.1 Cag-alfa Virulence cag PAI Protein 2e-55 44
virB11-2 YP_005779065.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-55 44
HP0525 AAR03888.1 VirB11-like protein Virulence cag PAI Protein 2e-55 44
HP0525 BAD13777.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-55 44
virB11-2 YP_005775728.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-55 44
HP0525 AAR03948.1 VirB11-like protein Virulence cag PAI Protein 2e-55 44
HP0525 BAD13804.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-55 44
HP0525 NP_207321.1 virB11-like protein Virulence cag PAI Protein 2e-55 44
virB11 AGC69807.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-55 44
HP0525 BAD14050.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-55 44
virB11-4 YP_003728739.1 cag pathogenicity island protein alpha Virulence cag PAI Protein 2e-55 44
HP0525 AAR03917.1 VirB11-like protein Virulence cag PAI Protein 2e-55 44
HP0525 BAD13831.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-55 44
HP0525 AAR03859.1 VirB11-like protein Virulence cag PAI Protein 1e-55 44
HP0525 BAD13941.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-55 44
HP0525 BAD13968.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-54 43
HP0525 BAD13858.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-54 43
unnamed AAP70289.1 Pilx11/VirB11-like protein Not tested HPI Protein 7e-59 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cmgB11 YP_008543055.1 type IV secretion system protein VirB11 VFG2218 Protein 1e-60 53
cmgB11 YP_008543055.1 type IV secretion system protein VirB11 VFG0285 Protein 9e-56 44