Gene Information

Name : N564_01653 (N564_01653)
Accession : YP_008541253.1
Strain : jejuni jejuni 00-2426
Genome accession: NC_022352
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1564154 - 1564807 bp
Length : 654 bp
Strand : +
Note : -

DNA sequence :
ATGATGAAAAAAGAACTTATTAAAATAAACAATTTAAATAAAGAATTTGGCAAAGTTAAAGCCTTAAACAATATCAACTT
AAGCGTCTATGAAGGAGAATGGCTTGCCATCATGGGTCCATCAGGAAGTGGAAAATCAACACTTTTAAACATACTATCGC
TCATGGATACTCCAAGCTCTGGAGAGTATATCTTGGATAATGAAAACCTAGAGCAAATGGATGAAGAGCAAAAAATCACC
TTGCGTCGTGAAAAAATAGGGCTTGTCTTTCAACAATTTCATCTTATCCCCTATCTTAACGCCTTAGAAAATGTTATGCT
CTCTCAGTATTATCACTCAAGTGTAGATGAAGAAGATGCCAAAATGGTTCTTGAAAAAGTAGGACTTTCGCATAGACTCA
CTCATTTACCTAGCCAATTAAGTGGCGGAGAACAACAAAGAGTTTGTATAGCAAGAGCTTTAATCAACAACCCAGAGCTT
TTACTCGCAGATGAACCCACAGGAAATTTAGATGAAGCCAATGAACAAATCGTTCTTCAAACCTTGCAAAAATTAAAAAA
TGAAGGTAAAACCATAGTTTTAATCACACACAATCCTGATTTAGCCAAATTCGCAGATCGAACCCTTATCTTACAACATG
GGGTGTTAAAATGA

Protein sequence :
MMKKELIKINNLNKEFGKVKALNNINLSVYEGEWLAIMGPSGSGKSTLLNILSLMDTPSSGEYILDNENLEQMDEEQKIT
LRREKIGLVFQQFHLIPYLNALENVMLSQYYHSSVDEEDAKMVLEKVGLSHRLTHLPSQLSGGEQQRVCIARALINNPEL
LLADEPTGNLDEANEQIVLQTLQKLKNEGKTIVLITHNPDLAKFADRTLILQHGVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N564_01653 YP_008541253.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-45 50
N564_01653 YP_008541253.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 9e-26 44
N564_01653 YP_008541253.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-30 44
N564_01653 YP_008541253.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-36 44
N564_01653 YP_008541253.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-32 44