Gene Information

Name : neuC1 (N564_01108)
Accession : YP_008540720.1
Strain : jejuni jejuni 00-2426
Genome accession: NC_022352
Putative virulence/resistance : Virulence
Product : UDP-N-acetylglucosamine 2-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.-
Position : 1053852 - 1054967 bp
Length : 1116 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAAAATAGTTTTTGTTAGCGGAACTAGAGCTGATTTTTCTAAAATAAAATCTCTAATGATGAAAGTTGAAAATTC
AAATGAATTTGAATTATTTATATTTGTAACCGGTATGCATATGAGTAAAAAGTTTGGTTCTACTTATATGGAAATAGAAA
AATGTGGTTTTAAAAATATATATAAATATATAAATCACGATAAGTATTATCAGATGGATAAGGCTTTATCATCAACAATA
GATGGTTTTTCTAAATTTATACATGAGATAGAGCCTGATTTAATAGTAGTGCATGGTGATAGAGTGGAGCCTTTAGCTGC
TGCTATAGTAGGAAGTTTAAATAATATCTTAGTGGCACATATAGAAGGCGGAGAGCTTTCAGGAACTATAGATGAGAGTT
TAAGACATGCTATTAGTAAATTAGCACATATTCATTTAGTAAATGATGAAATAGCAAAAAAAAGATTAATACAAATGGGT
GAAGATGAGAAATCTATTTTTATTATAGGTTCTCCTGATTTAGAATTGCTAAATAATACTATATCTTTAGATGAAGCAAA
AAAATATTATGATATAAAATTTAAAAATTATGCCATAGCTATATTTCATCCAATTACAACCGAAATAAACTCTTTATATA
AACAAAGTGAAGAATTTGTAAATGCTCTTATAAAAAGTGAAAAAAATTATATAGTTATTTATCCAAATAATGATTTAGGA
TTTGAATTAATTTTGCAAAATTATGAAAGGCTAAAAAATAATGAAAGATTTAAAATTTTTCCTTCTTTAAGATTTGAGTA
TTTTATAAGTTTGCTAAAAAATGCCAATTTTATCATAGGAAATTCAAGTTGTATAATAAAAGAAGCTTTATATCTTAATA
TAAATGGAATTTTAGTTGGTTCAAGACAAGATGGTAGAACTGACATTAATAAAACAATAAGAGTAAATGCAGAGGAAAAG
GATATATTGGAAGCGATTTTAAATACTAGTAAATGCACTAATATTACAAATAAAAGACTAGAAATTTTAAATAGTTCTGA
GCAATTTTATAGGTTATTGAAAAATAATATTTTATTTACTATAAACAAGCAAAAAATATTCATGGATAAAAAATGA

Protein sequence : 
MKKIVFVSGTRADFSKIKSLMMKVENSNEFELFIFVTGMHMSKKFGSTYMEIEKCGFKNIYKYINHDKYYQMDKALSSTI
DGFSKFIHEIEPDLIVVHGDRVEPLAAAIVGSLNNILVAHIEGGELSGTIDESLRHAISKLAHIHLVNDEIAKKRLIQMG
EDEKSIFIIGSPDLELLNNTISLDEAKKYYDIKFKNYAIAIFHPITTEINSLYKQSEEFVNALIKSEKNYIVIYPNNDLG
FELILQNYERLKNNERFKIFPSLRFEYFISLLKNANFIIGNSSCIIKEALYLNINGILVGSRQDGRTDINKTIRVNAEEK
DILEAILNTSKCTNITNKRLEILNSSEQFYRLLKNNILFTINKQKIFMDKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
synX NP_273134.1 polysialic acid capsule biosynthesis protein SynX Not tested IHT-A Protein 3e-67 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
neuC1 YP_008540720.1 UDP-N-acetylglucosamine 2-epimerase VFG0254 Protein 1e-67 45