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Name : lysS (N565_00433) Accession : YP_008538348.1 Strain : jejuni jejuni 00-2538 Genome accession: NC_022351 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 396257 - 397762 bp Length : 1506 bp Strand : + Note : - DNA sequence : ATGTTTGATAATATTTTAGAGCAGCAAAGAATAGAAAAAGCTAAGGAATTAAAAAATTTAGGGATCAATCCTTATCCTCA TTTTTTAGAAAAAGAAATGTCTTTAAAGACTTTTAAGGATAAATTTTCTTATATTTTAGAGCAAGTTGAAAAAAGAGATG AAAGTGTCAATGCTGTTGTTGCAGGACGTTTGAAACTTTTGCGTATAGCTGGGAAATCGATTTTTGCAAACATTGAAGAT GAGGATACAAATTTACAAATTTATTTTAGTAAAGATAGCGTAGGCGAAGAGCTTTATACGATTTTAAAAAAGAATTTAGA GGTGGGTGATATTGTTTTGGTTAAAGGTTTTCCTTTTGTAACTAAAACAGGTGAGTTTAGTTTACATGCAAGTGAAGTAA AACTCGCTACAAAAGCTATTGTTCCTTTACCTGAAAAATATCATGGATTAACAGATATTGAGCAAAGATATCGTAAACGT TATGTTGATATGATAATGAATGTCGAAGTTAGAAAAGATTTTTTAGTGCGTTCTAAAGTGGTGAGTTTAATCCGTCATTT TTTTGAAAATAAAGGCTTTTTAGAAGTAGAAACTCCTATGATGCATCCGATTGCAGGTGGAGCAAACGCTAAGCCTTTTG TAACTTTTCATAATTCTTTAGGCGTAGAAAGATTTTTAAGAATTGCTCCAGAACTTTATCTTAAAAGACTTATAGTAGGT GGTTTTGAGGCGGTTTTTGAAATCAATCGTTGTTTTAGAAACGAAGGTATGGATTTAACTCATAATCCCGAATTTACAAC TATAGAATTTTATTGGGCCTATCATAATTATAAAGATTTAATGGATTTAACCGAAGAACTTTTTGCTTTACTTTTGGATA AACTTAATTTAGGAAAAACAATAGAATTTGATGGAAAAATGATAAATTTTTCTAAACCTTTTGAAAGAATAACCTATAAA GACGCACTTTGTAAGTATGGTGGTTTAGATAGGGATTTAATCGAAGATAAGGAAAAAATTCTTACTAAATTAAAAGCAGA TGGTTTTGAAGCGAATGAAAAGCTTGAACTTGGACATTTGCAAGCTGAACTTTTTGACAATTATGTGGAAGAAAAATTGA TCAATCCTACTTTTGTGATTGATTTTCCTATTTCCATAAGTCCTTTATCAAGACGTAGCGATGAGGATTCTCAGATTGCT GAGAGATTTGAGTTGTTTATTTGCGGAAGAGAATTGGCAAATGGTTTTAATGAGCTTAATGATCCTCTTGATCAATATGA GAGATTTTTAAAACAAATTGAAGCTAAAAATGCAGGCGATGAAGAGGCTTGTGAAATGGATGAAGATTTTGTAAATGCTT TGGGTTATGGAATGCCTCCAACGGCAGGGCAGGGCATAGGTATAGATAGACTTGTTATGCTTTTGACAAATAAAAAATCC ATTCGTGATGTGATATTGTTTCCTGCAATGCGTCCATTAAAATCAGAACTAAAGGAGAAAGAATGA Protein sequence : MFDNILEQQRIEKAKELKNLGINPYPHFLEKEMSLKTFKDKFSYILEQVEKRDESVNAVVAGRLKLLRIAGKSIFANIED EDTNLQIYFSKDSVGEELYTILKKNLEVGDIVLVKGFPFVTKTGEFSLHASEVKLATKAIVPLPEKYHGLTDIEQRYRKR YVDMIMNVEVRKDFLVRSKVVSLIRHFFENKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPELYLKRLIVG GFEAVFEINRCFRNEGMDLTHNPEFTTIEFYWAYHNYKDLMDLTEELFALLLDKLNLGKTIEFDGKMINFSKPFERITYK DALCKYGGLDRDLIEDKEKILTKLKADGFEANEKLELGHLQAELFDNYVEEKLINPTFVIDFPISISPLSRRSDEDSQIA ERFELFICGRELANGFNELNDPLDQYERFLKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKS IRDVILFPAMRPLKSELKEKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 8e-105 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_008538348.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 4e-105 | 47 |
