Gene Information

Name : kpsT (N565_01479)
Accession : YP_008539365.1
Strain : jejuni jejuni 00-2538
Genome accession: NC_022351
Putative virulence/resistance : Virulence
Product : capsular polysaccharide ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.38
Position : 1413664 - 1414326 bp
Length : 663 bp
Strand : -
Note : -

DNA sequence : 
ATGATAAAGTTAATTAATCTAACAAAATCTTATCCTTTATTTAGTGGTGGAAGACATTATGTTTTTAAGAATTTTACTTT
TGAGTTTCCTGAAAATTGTAGCATAGGTTTGATGGGGTATAATGGAGCGGGTAAATCTACTCTTATGCGTCTTTTAAGCG
GGGCAGAACTTCCTGATAGTGGTAAGATAATTACTAATAAAAAATTATCTTGGCCATTGGGTTTAAATGGGGCTTTTCAA
GGTTCTTTAACAGCTAGAGATAATGCTAAATTTGTAGCTAGAGTATATGGTTATAAAGGAAAAGAACTCCAAGAAAAAGT
AAAATTTGTGGAAGATTTTGCAGAACTTGGGAAATTTTTTGATGAGCCTATGAAGACTTATTCTTCGGGAATGAGTGCTA
GGATAGCTTTTGGACTTAGTATGGCCTTTGATTTTGATTATTATTTGATTGATGAAGCAGGAGCTGTTGGAGATCCTGCT
TTTAGGGAAAAAAGTGTGAAATTATATAGAGAAAGATTAAGCAAATCAAAAGTGATTATGGTATCTCATAATGTAGCTGA
AATTAAAGAATGGTGTGATAAAATAATTTATATGAAAAATGGACAAATTACGGTTTATGATGATGTAGATGAAGGAATAG
CTGTATATCAAGGAAAAGTTTAA

Protein sequence : 
MIKLINLTKSYPLFSGGRHYVFKNFTFEFPENCSIGLMGYNGAGKSTLMRLLSGAELPDSGKIITNKKLSWPLGLNGAFQ
GSLTARDNAKFVARVYGYKGKELQEKVKFVEDFAELGKFFDEPMKTYSSGMSARIAFGLSMAFDFDYYLIDEAGAVGDPA
FREKSVKLYRERLSKSKVIMVSHNVAEIKEWCDKIIYMKNGQITVYDDVDEGIAVYQGKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 3e-57 59
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 2e-57 56
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 2e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kpsT YP_008539365.1 capsular polysaccharide ABC transporter, ATP-binding protein VFG1449 Protein 1e-57 59
kpsT YP_008539365.1 capsular polysaccharide ABC transporter, ATP-binding protein VFG0696 Protein 9e-38 44
kpsT YP_008539365.1 capsular polysaccharide ABC transporter, ATP-binding protein VFG0258 Protein 7e-37 43
kpsT YP_008539365.1 capsular polysaccharide ABC transporter, ATP-binding protein VFG2563 Protein 2e-38 43