Gene Information

Name : TBHG_01889 (TBHG_01889)
Accession : YP_002161883.1
Strain : Mycobacterium tuberculosis Haarlem
Genome accession: NC_022350
Putative virulence/resistance : Virulence
Product : thiol peroxidase Tpx
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2183003 - 2183500 bp
Length : 498 bp
Strand : +
Note : -

DNA sequence : 
ATGGCACAGATAACCCTGCGAGGAAACGCGATCAATACCGTCGGTGAGCTACCTGCTGTCGGATCCCCGGCCCCGGCCTT
CACCCTGACCGGGGGCGATCTGGGGGTGATCAGCAGCGACCAGTTCCGGGGTAAGTCCGTGTTGCTGAACATCTTTCCAT
CCGTGGACACACCGGTGTGCGCGACGAGTGTGCGAACCTTCGACGAGCGTGCGGCGGCAAGTGGCGCTACCGTGCTGTGT
GTCTCGAAGGATCTGCCGTTCGCCCAGAAGCGCTTCTGCGGCGCCGAGGGCACCGAAAACGTCATGCCCGCGTCGGCATT
CCGGGACAGCTTCGGCGAGGATTACGGCGTGACCATCGCCGACGGGCCGATGGCCGGGCTGCTCGCCCGCGCAATCGTGG
TGATCGGCGCGGACGGCAACGTCGCCTACACGGAATTGGTGCCGGAAATCGCGCAAGAACCCAACTACGAAGCGGCGCTG
GCCGCGCTGGGCGCCTAG

Protein sequence : 
MAQITLRGNAINTVGELPAVGSPAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAASGATVLC
VSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAAL
AALGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-33 44
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-33 44
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-33 43
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-33 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TBHG_01889 YP_002161883.1 thiol peroxidase Tpx VFG0087 Protein 4e-34 44