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Name : N646_0762 (N646_0762) Accession : YP_008535132.1 Strain : Genome accession: NC_022349 Putative virulence/resistance : Virulence Product : VscC Function : - COG functional category : - COG ID : - EC number : - Position : 850572 - 852386 bp Length : 1815 bp Strand : - Note : - DNA sequence : GTGAGTGTTGTTCCTTTGGGATACGCGCAAGCAACAGACTTACACTGGCCCGAACAACCGTTCCGCTACTATGCAGATAA CGACTCATTAAAAGAGTTGTTGAATAACTTCGGTGCAAATTATCGTATCTCGGTTTCTGTTAGTGACAAAGTCAACGATC GAGTGAATGGGCGTTTTACCCCTGAAGATCCGGCGGAATTCCTCGATTACTTATCGCAAGTGTACAACTTGATGTGGTAT TTCGATGGAGCCGTCTTACATGTCTATAAGGCGACAGAAACTCGCTCACGTTTACTTCAATTGGAATTACTTACGGCTAG AGAGCTACGCAGTACGTTAATTTCCACCGGCGTTTGGGATTCTCGTTATGGTTGGAGAGCTGCTGAGAGCAAAGGGTTAG TCTATCTTGCGGGTCCTCCACGTTATGTCGACTTAGTGGTACAAACGGCGGAGGCATTGGAAACGCGCTTGCTGCAGAAA TCGAATTCAACCGACGAATTATTCGTTGAGATAATTCCTTTGAAGTACGCTTCTGCAACGGATAGAGAAATTGCATATCG AGATCAGACAATTACGGTCCCTGGCATCGCATCGGTGTTAAAACGGGTCGTGTCTGGTGTTCAAACTCAAGTGACGAGTG CGTCTAGCAAAGAAGTTACCAGTTCAGATAAGCCTGTAAAAAGTAATAAAACCGCCTCAGTTCATGGTGGCGCAACAGTT GAAGCAGAGCCGGGCCTTAATGCGATTATCGTTCGTGATACTCAAGCACGATTACCGCTCTATCGTAAACTGGTCGCGCA ATTAGACCAGCCGCAATCAAGAATTGAAGTCGCGCTATCGATTGTCGATATCAGTGCCAACGATTTAAGTCAGTTAGGCG TGGATTGGCGAGCAGGAGTGTCTGTCGGAAACAACCGCATTGTCGATATCAAAACAACAGGTGATGTGAATTCGGGGGAT GTGACGCTCGGCAGTGGACAGAACTTTAAGTCCTTGCTTGATTCAACCAACCTAAATTACTTGCTGGCTCAAATTCGTTT ATTGGAATCCAAAGGCAGTGCTCAAGTGGTTTCAAGACCAACATTGTTAACTCAGGAAAATGTCGAAGCGGTACTGAACA ACAGCAGCACGTTTTACGTCAAGCTGGTTGGTAAAGAAACCGCAGCGCTGGAAGAGGTCACGTATGGCACGTTACTGAGA ATTGTCCCACGTATCGTTGGTGATAGATTTGCTGCACGACCTGAAATTAACCTGAGCCTTCATCTCGAAGACGGTGCAAA GATCGCTGATGGTGGCGTCGATGACCTTCCTTCCGTTCGTAAAACTGAAATCAGCACCTTAGCGACGGTTAAACAAGGGC AAAGCTTACTTATCGGTGGTGTATACCGAGATGAAGTGAGCCATCAGTTACGTAAAGTGCCATTGCTAGGAGACATCCCA TATTTAGGCGCGCTGTTTAGAAGTAATACCAATACTAAGCGCCGCACAGTACGAATGTTTATTTTAGAACCTCGAATTGT TGTGGATGGTATTGGCGATAGTGTGTTGATTGGCAACGAATATGACTTGCGACCAAGTATCGGCAAGCTTAACAACATCT CCAACAATAGCGCTGAATTTAAATCGGTAGTGGAAGTATATAGCTGCACATCGAGGGTTCAAGCCGAGCGCTATCAACAA GACTTATTGTCACAGCAAAAGTCGTCTCAATTAACGCAGTGCCGATTACCAACAGGGCAAAAGGGTTGGCGGGTGAAAGT ATTGGAATGTGATGACTCACAAAGTGAGTGTGTGCGCCCTTCAGAGGAGTCTTAA Protein sequence : MSVVPLGYAQATDLHWPEQPFRYYADNDSLKELLNNFGANYRISVSVSDKVNDRVNGRFTPEDPAEFLDYLSQVYNLMWY FDGAVLHVYKATETRSRLLQLELLTARELRSTLISTGVWDSRYGWRAAESKGLVYLAGPPRYVDLVVQTAEALETRLLQK SNSTDELFVEIIPLKYASATDREIAYRDQTITVPGIASVLKRVVSGVQTQVTSASSKEVTSSDKPVKSNKTASVHGGATV EAEPGLNAIIVRDTQARLPLYRKLVAQLDQPQSRIEVALSIVDISANDLSQLGVDWRAGVSVGNNRIVDIKTTGDVNSGD VTLGSGQNFKSLLDSTNLNYLLAQIRLLESKGSAQVVSRPTLLTQENVEAVLNNSSTFYVKLVGKETAALEEVTYGTLLR IVPRIVGDRFAARPEINLSLHLEDGAKIADGGVDDLPSVRKTEISTLATVKQGQSLLIGGVYRDEVSHQLRKVPLLGDIP YLGALFRSNTNTKRRTVRMFILEPRIVVDGIGDSVLIGNEYDLRPSIGKLNNISNNSAEFKSVVEVYSCTSRVQAERYQQ DLLSQQKSSQLTQCRLPTGQKGWRVKVLECDDSQSECVRPSEES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscC | AAO18033.1 | LscC | Virulence | TTSS locus | Protein | 1e-127 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| N646_0762 | YP_008535132.1 | VscC | VFG0402 | Protein | 7e-135 | 48 |
| N646_0762 | YP_008535132.1 | VscC | VFG0211 | Protein | 2e-128 | 47 |
