Gene Information

Name : N646_0755 (N646_0755)
Accession : YP_008535125.1
Strain :
Genome accession: NC_022349
Putative virulence/resistance : Virulence
Product : putative type III secretion lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 846714 - 847457 bp
Length : 744 bp
Strand : -
Note : -

DNA sequence : 
ATGATGAATAAAATGAGAGCAGTTTTCATCATGCTCACGTTGTTTCTGGTAGGTTGTCAGACCGAGTTATACACCAACGT
TACTCAGAAAGAGGGTAATGAGATGTTGTCGATCTTACTATCCGAAGGTGTCGTTGCAACAAAAGAACCTGACAAAGACA
ACACCGTCAAGTTAATGGTAGACAGTTCTCAAATCGCCTTTGCGGTAGATGCGCTAAAGCGAAAAGGTTATCCAAGAGAG
CAGTTTTCTACACTGAAAGAGGTGTTTCCTAAAGACGATTTGATCTCGTCACCATTAGCAGAGCGAGCACGTTTGGTGTA
CGCGAAATCTCAAGAGCTCTCGTCAACCTTATCTCAGATTGATGGCGTGCTGGTGGCACGTGTTCATGTTGTTTTGGAAG
ATCAAGATCTGCGTCCAGGAGAGCGCCCAACTCCAGCTTCTGCCTCCGTATTTATTAAACACGCGGCAGATATTGCGCTT
GATTCATATGTCCCGCAGATCAAATTATTAGTGAACAACAGTATTGAGGGGTTGAACTACGATCGAATCAGCGTAGTGAT
GGTACCCTCATCAGAGGTTCGAGTTGCTACTCAAAACAATCAATTTAAAAGCATTTTGTCGGTTCAGGTCACCAAAGAGA
CGGCGAATAATCTTATCGCCATTTTGGTGTTCTTGGTAGCGGCACTCATCGGCTCGAATATCGCTACTTTTACATGGTGT
CGTAGGAACACGAAGCGTGGTTAA

Protein sequence : 
MMNKMRAVFIMLTLFLVGCQTELYTNVTQKEGNEMLSILLSEGVVATKEPDKDNTVKLMVDSSQIAFAVDALKRKGYPRE
QFSTLKEVFPKDDLISSPLAERARLVYAKSQELSSTLSQIDGVLVARVHVVLEDQDLRPGERPTPASASVFIKHAADIAL
DSYVPQIKLLVNNSIEGLNYDRISVVMVPSSEVRVATQNNQFKSILSVQVTKETANNLIAILVFLVAALIGSNIATFTWC
RRNTKRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscJ AAO18027.1 LscJ Virulence TTSS locus Protein 5e-63 60
hrcJ NP_791211.1 type III secretion protein HrcJ Virulence Hrp PAI Protein 2e-27 44
hrpC AAB00129.1 HrpC Virulence Hrp PAI Protein 2e-27 44
XC_3009 YP_244077.1 HrcJ protein Virulence Hrp PAI Protein 6e-34 43
hrcJ NP_636607.1 HrcJ protein Virulence Hrp PAI Protein 6e-34 43
hrcJ AAT96157.1 HrcJ Virulence T-PAI Protein 1e-27 43
hrcJ AAT96211.1 HrcJ Virulence T-PAI Protein 1e-27 43
hrpB3 AAB08458.1 HrpB3 Virulence Hrp PAI Protein 7e-33 42
hrcJ YP_362160.1 HrcJ protein Virulence Hrp PAI Protein 9e-33 42
hrcJ AAP34342.1 HrcJ Virulence Hrp PAI Protein 6e-33 42
hrcJ AAB05080.1 HrcJ Virulence Hrp PAI Protein 5e-29 42
hrcJ AAC35801.1 putative hrp type III secretion pathway protein Virulence Hrp PAI Protein 9e-28 42
hrcJ NP_640764.1 HrcJ protein Virulence Hrp PAI Protein 2e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N646_0755 YP_008535125.1 putative type III secretion lipoprotein VFG0218 Protein 7e-62 67
N646_0755 YP_008535125.1 putative type III secretion lipoprotein VFG0409 Protein 3e-63 59
N646_0755 YP_008535125.1 putative type III secretion lipoprotein VFG0051 Protein 4e-35 43