Gene Information

Name : N646_0753 (N646_0753)
Accession : YP_008535123.1
Strain :
Genome accession: NC_022349
Putative virulence/resistance : Virulence
Product : type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 845439 - 846077 bp
Length : 639 bp
Strand : -
Note : -

DNA sequence : 
ATGGTTTCATTTGTTGAAATAAAAACAGACAATTTGCAGCTAGCACCTGGCTTAAAGGTGCTGAAAGCGAAAGATTATGC
CAGTTATCTGGATTCGCAACACTTAGTTGAAGCCGCGAACTCCAAAGCTGAAAGCATCATTGCTAATGCCCAACAAGCCT
ACGAAACCGAAAAACAACGTGGTTATCAAGATGGCCTTGCACAAGCCAAGATTGAAAATGCGCAAACGATGGTTGAAACC
TTAGCACGTTGTAATGACTACTATCAGCAAGTCGAAGAAAAAATGACAGGTGTGGTGTTAGAAGCAGTACGTAAGATCAT
CGATACCTTCGATGATGTCGATACCACGGTGAGTGTAGTTCGAGAAGCGTTGCAACTGGTGAGTAACCAAAAGCAGGTCA
TTTTACATGTCCACCCAGAGCAGGTTGTTGAGGTGAGAGAAAAGGTGGCTGGTGTATTAAGTGATTTCCCTGAAGTCGGT
TACGTTGACGTGGTAGCAGATGCGCGCTTGAAAAATGGAGGCTGCATTTTGGAAACAGAAGTTGGGATCATCGACGCCAG
TATTGATGGACAGCTGCATGCATTAAAGCAAGCCATGGTGAAGCAGCTCAGCGAGCGTAAAATTACGATTCATGAATAA

Protein sequence : 
MVSFVEIKTDNLQLAPGLKVLKAKDYASYLDSQHLVEAANSKAESIIANAQQAYETEKQRGYQDGLAQAKIENAQTMVET
LARCNDYYQQVEEKMTGVVLEAVRKIIDTFDDVDTTVSVVREALQLVSNQKQVILHVHPEQVVEVREKVAGVLSDFPEVG
YVDVVADARLKNGGCILETEVGIIDASIDGQLHALKQAMVKQLSERKITIHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18079.1 LscL Not tested TTSS locus Protein 4e-47 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N646_0753 YP_008535123.1 type III secretion protein VFG0220 Protein 2e-50 53
N646_0753 YP_008535123.1 type III secretion protein VFG0411 Protein 3e-47 53
N646_0753 YP_008535123.1 type III secretion protein VFG0049 Protein 5e-29 42