Gene Information

Name : N646_0743 (N646_0743)
Accession : YP_008535113.1
Strain :
Genome accession: NC_022349
Putative virulence/resistance : Virulence
Product : translocation protein in type III secretion
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 836830 - 837879 bp
Length : 1050 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTGCAGAAAAAACAGAGCAACCCACCGCAAAAAAGTTACGCGATGCTCGGCAGAAAGGTCAGGTTGCCAAAAGCCA
AGAAATCGTATCGTCTGCATTAATTTTGGCGCTCATAATTGTACTGTTTGCGTTCGCCGATTATTACATGTCGCACATCT
CAGCGCTTATTCTCCTACCAAGTAAGCTTGCTTATCAGGGTTTCCAAGATGCGCTAGTCGATGTCGCTATCGCCATCGCA
AAAGAAATTGCCTATCTACTCGCTCCGATTATTCTGGTTGCTGCACTCGTCGCCATCTTTTCCAATATGGGGCAGTTCGG
GTTCCTATTTAGTGGTGAATCCGTTAAACCCGACATCAAAAAGATCAATCCCGTCGAAGGGGCCAAACGCATTTTTTCCC
TCAAGAGTGTGATTGAGTTTATCAAGTCGATCCTTAAAGTCTCTCTTCTTTCCTGCATTATCTGGGTGACATTACGCGGT
AACATCAACGCTTTAATGCAAATTCCAACTTGTGGGCTAGAATGTGTCCCGACCATTACTGGCGTCATGATTAAACAATT
AATGATTATCTCTTCGGTAGGCTTCATCGTCATCGCTGCCGCAGATTTTGCGTACCAGAAGTTTGATCACACGAAAAAGC
TCAAAATGAGCAAGGACGAAGTGAAGCGCGAATACAAAGAGATGGAAGGCAGTCCAGAAATAAAAAGCAAACGTCGTCAG
TTACACCAAGAGCTACAAGCCTCTAATCAACGTGAAAACGTTAAACGTTCTAATGTATTAGTTACAAACCCAACACATAT
CGCGGTTGGCCTTTATTACAAGAAAGGCGAAACGCCCCTGCCCGTCATCACTTTGATGGAAACCGATGCGGTAGCCAAAC
GTATGGTCGCAATCGCTAAAGAGGAAGGCGTGCCTGTGATGCAAAAAGTCCCTCTTGCTCGTGCACTATACGCCGACGGT
AACGTCGACCAGTACATCCCAAGCGATCTTATTGAGGCAACTGCGGAAGTGCTTCGTTGGTTGGCTTCGTTAGAGTCCGA
GGCGGACTAA

Protein sequence : 
MSAEKTEQPTAKKLRDARQKGQVAKSQEIVSSALILALIIVLFAFADYYMSHISALILLPSKLAYQGFQDALVDVAIAIA
KEIAYLLAPIILVAALVAIFSNMGQFGFLFSGESVKPDIKKINPVEGAKRIFSLKSVIEFIKSILKVSLLSCIIWVTLRG
NINALMQIPTCGLECVPTITGVMIKQLMIISSVGFIVIAAADFAYQKFDHTKKLKMSKDEVKREYKEMEGSPEIKSKRRQ
LHQELQASNQRENVKRSNVLVTNPTHIAVGLYYKKGETPLPVITLMETDAVAKRMVAIAKEEGVPVMQKVPLARALYADG
NVDQYIPSDLIEATAEVLRWLASLESEAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscU AAO18037.1 LscU Virulence TTSS locus Protein 6e-94 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N646_0743 YP_008535113.1 translocation protein in type III secretion VFG0185 Protein 4e-87 63
N646_0743 YP_008535113.1 translocation protein in type III secretion VFG0397 Protein 2e-86 61
N646_0743 YP_008535113.1 translocation protein in type III secretion VFG0041 Protein 3e-59 45