Gene Information

Name : N646_0726 (N646_0726)
Accession : YP_008535096.1
Strain :
Genome accession: NC_022349
Putative virulence/resistance : Virulence
Product : low calcium response locus protein H
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 823519 - 824004 bp
Length : 486 bp
Strand : -
Note : -

DNA sequence : 
ATGACTAAAACAAACGCGACCGATCCATCCCAAATGCAAGCAGAAGAGCTGCTGTCTTTTCTGGAAGAGGGAGGCACGCT
AAAAATGTTGCACGATGTGTCTCAGGACACCATCGAACACATTTATGCCGTAGGTTACAACTTTTTCCAATCGGGAAAGA
TTGAGCAAGCAGCGAAAGTATTTCAATTACTCAGCATGCTTGATCATTATCAGGCGCGATTTTTCATTGGCCTTGGCGCG
GCTCGTCAGGAGTTGGGTGAGTATCTGCAGGCAATAGACGCCTACAGCTACGCAGCGCTAGTGGACGTAAATGATCCACG
CCCACCTTTTCACTCTGCTGAATGTCACCTGAAACTGGAACAACTGACAGAAGCAGAGAGTGGGTTTTACAGCGCGAAGG
AGATGTCTGCCGGAAAATCACAATATGCAGATTTGCATGAGCGTGCAGGCATCATGTTAGAAGCGGTGAGAAATAAAAAG
GAGTAA

Protein sequence : 
MTKTNATDPSQMQAEELLSFLEEGGTLKMLHDVSQDTIEHIYAVGYNFFQSGKIEQAAKVFQLLSMLDHYQARFFIGLGA
ARQELGEYLQAIDAYSYAALVDVNDPRPPFHSAECHLKLEQLTEAESGFYSAKEMSAGKSQYADLHERAGIMLEAVRNKK
E

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssH AAO18054.1 LssH Virulence TTSS locus Protein 2e-35 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N646_0726 YP_008535096.1 low calcium response locus protein H VFG0202 Protein 2e-39 55
N646_0726 YP_008535096.1 low calcium response locus protein H VFG0380 Protein 3e-37 53