Gene Information

Name : N646_1980 (N646_1980)
Accession : YP_008536339.1
Strain :
Genome accession: NC_022349
Putative virulence/resistance : Virulence
Product : cadaverine/lysine antiporter CadB, putative
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2146468 - 2147811 bp
Length : 1344 bp
Strand : -
Note : -

DNA sequence :
ATGTCATCGAATGCGAAAAAAATCGGCCTTATTGCCTGTACGGGTGTCGTAGCCGGTAACATGATGGGTAGTGGTATTGC
ACTATTACCTTCTAGTCTTGCCTCTGTAGGCTCTGTTTCAATCTTCAGTTGGCTGATCTGTTTGGTCGGTGCACTGAGTC
TGGCGTTCGTTTACGCTCGTCTGGCAACCAAAAACCCACAAGAAGGTGGTCCTATCGCTTATGCTGGCGAAGTGTCTCCG
GTATTTGGTTTCCAAACGGGCGTTCTTTATTACCACGCGAACTGGATTGGTAACCTGGCTATTGCCATTACAGGTGTTTC
TTACCTTTCAGTATTCTTCCCTGTGCTTAATAACCCAATTCCAGCAGGTATTGCGACGATTGCATCGGTATGGATCTTCA
CTTTCGTCAACCTACTTGGTGGTAGCTGGGTAAGCCGTCTATGTACGCTTGGTTTAGTTCTTATCCTTATCCCAGTTGTT
GGTACAGCTGCATTTGGTTGGACGCACTTCGATACTGCGCTTTACAGCCAAAACTGGAACGTATCAGCAGGCACTGACAG
CCACGCGGTAGTAACAGCGGTTCTTATCTGTCTATGGTCATTCGTAGGTGTGGAATCAGCAGCGGTATCGACGGGTATGG
TAGAAAACCCTAAACGTACTGTACCACTAGCAACTATGTTAGGTACTGGTATCGCAGGTGTGATTTACATCCTATCAACT
CAAATGATCAGCGGCATGTTCCCAGCGTCAGAAGTTGCGGCATCAGGTGCGCCATTTGCATTGGCAACCACTGAGCTATT
CGGTAGCTGGACTGCACCATTCGTATCAGCATTCACAGCACTAGCATGTTTCACTTCGCTAGGTTCTTGGATGATGCTGG
TGGGCGAGGCTGGTAAACGTGCAGCAAGCGATGGCAACTTCCCTAAAATCTACGGCGAAACTGACAAAAACGGTGTGCCT
AAGAAAGGTCTAATCCTTGCGTCAATCAAGATGACTGCACTGATGGTTGTACTGATGTTCTTCAGCTCTAAAACAGCACA
CGCATCAGACCTGTTCAACCAGCTAACGACTGACGCAGTTCTACTAACAATGCTGCCTTACTTCTACTCAAGCATTAACT
TGATTCGCTTCGAAGGTATGACAACACGCAACGGCTTCGTAATGCTGTTCTCTGGTGTGGCTTGTCTGTTCTGCTTCATC
GCACTAGCAGGTGCAGAGGGCGGTACGCTAACAGCAACCTTCATCGTGTCTCTAGTTATCTTGATGTTCTACAGCAAAAA
AGCAGGTCTTGCTCAGTACGTGAAAATGCACGCTGACGACATGCCTGCCCAAGCAAGCAACTAA

Protein sequence :
MSSNAKKIGLIACTGVVAGNMMGSGIALLPSSLASVGSVSIFSWLICLVGALSLAFVYARLATKNPQEGGPIAYAGEVSP
VFGFQTGVLYYHANWIGNLAIAITGVSYLSVFFPVLNNPIPAGIATIASVWIFTFVNLLGGSWVSRLCTLGLVLILIPVV
GTAAFGWTHFDTALYSQNWNVSAGTDSHAVVTAVLICLWSFVGVESAAVSTGMVENPKRTVPLATMLGTGIAGVIYILST
QMISGMFPASEVAASGAPFALATTELFGSWTAPFVSAFTALACFTSLGSWMMLVGEAGKRAASDGNFPKIYGETDKNGVP
KKGLILASIKMTALMVVLMFFSSKTAHASDLFNQLTTDAVLLTMLPYFYSSINLIRFEGMTTRNGFVMLFSGVACLFCFI
ALAGAEGGTLTATFIVSLVILMFYSKKAGLAQYVKMHADDMPAQASN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadB NP_756989.1 lysine/cadaverine antiporter Not tested PAI II CFT073 Protein 1e-132 69
cadB AAL67382.1 cadaverine/lysine antiporter Not tested PAI II CFT073 Protein 7e-133 69
unnamed CAD66196.1 putative lysin/cadaverin transporter Virulence PAI III 536 Protein 9e-130 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N646_1980 YP_008536339.1 cadaverine/lysine antiporter CadB, putative VFG1671 Protein 5e-130 67