Gene Information

Name : N646_1343 (N646_1343)
Accession : YP_008535713.1
Strain :
Genome accession: NC_022349
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein P
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1434388 - 1435257 bp
Length : 870 bp
Strand : -
Note : -

DNA sequence : 
ATGACAAAGGGTAATCCAATTCGTTTGCTCCTGAGTACGTTGTTACTTTTTGTCGGCGTGCTGTTTTCTTCATTTACCTT
TGCTGAAGCAGAGGAGTCAGCGCTGCCAGATAACTTAGCCGATGGAAGTAGTGTTACAGTTCAGGCTATGCAAAGTGATA
CTGGTGCTAGCCGTGCTATGTCCGTTTCTAGTGGCGGTGGTATTCCAGCATTCACCATGACCACGAACCCTGATGGCAGT
GAAGACTACTCGGTTACACTACAAATTTTAGCGTTAATGACCATGCTTGGCTTCTTGCCTGCCATGGTGATTCTGATGAC
CTCGTTCACTCGAATTGTGGTGGTGATGTCGATATTGCGTCAGGCAATGGGTTTGCAACAAACGCCTTCTAATCAGGTTA
TTATTGGTATTGCGCTGTTTTTGACCTTTTTTGTTATGTCCCCTGTCCTGAACGAAATCAACGACAAAGCTGTTCAGCCT
TATTTGAACGAGCAAGTCACGGCGCGAGAAGCGTTTGATGCTGCACAAGCGCCAATGAAAGCATTTATGCTTAAGCAGAC
CCGAATCAAAGACTTGGAGACGTTCGTAACCATGTCAGGAGAGCAAGTCGAGAATCCAGAAGATGTGTCGATGGCGGTGT
TGATTCCGGCTTTTATCACCTCAGAGCTAAAAACTGCATTCCAAATTGGCTTTATGCTCTTCTTGCCGTTTTTGATTATT
GACCTTGTAGTCGCTTCGGTACTGATGGCAATGGGTATGATGATGTTGTCACCAATGATTGTTTCGTTGCCGTTCAAGTT
GATGTTGTTCGTATTGGTCGATGGTTGGAACTTGATACTCTCGACACTTGCGGGCAGCTTTGCCCTTTAG

Protein sequence : 
MTKGNPIRLLLSTLLLFVGVLFSSFTFAEAEESALPDNLADGSSVTVQAMQSDTGASRAMSVSSGGGIPAFTMTTNPDGS
EDYSVTLQILALMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQTPSNQVIIGIALFLTFFVMSPVLNEINDKAVQP
YLNEQVTAREAFDAAQAPMKAFMLKQTRIKDLETFVTMSGEQVENPEDVSMAVLIPAFITSELKTAFQIGFMLFLPFLII
DLVVASVLMAMGMMMLSPMIVSLPFKLMLFVLVDGWNLILSTLAGSFAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-26 43
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 1e-27 42
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 1e-27 42
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 4e-28 42
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 4e-28 42
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 9e-28 42
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 6e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
N646_1343 YP_008535713.1 flagellar biosynthesis protein P VFG1259 Protein 2e-63 67
N646_1343 YP_008535713.1 flagellar biosynthesis protein P VFG2016 Protein 3e-59 63
N646_1343 YP_008535713.1 flagellar biosynthesis protein P VFG2494 Protein 3e-54 58
N646_1343 YP_008535713.1 flagellar biosynthesis protein P VFG2338 Protein 2e-47 53