|
Name : N646_1255 (N646_1255) Accession : YP_008535625.1 Strain : Genome accession: NC_022349 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 1343494 - 1345461 bp Length : 1968 bp Strand : - Note : - DNA sequence : ATGTCTCGTCTGTTTATTGCTGAAAAACCAAGCTTAGGCCGTGCGATTGCCGCTGCACTGCCAAACCCTCAAAAGAAAGA TCAAGGATTCATCCGCTGTGGGAACGGGGATATCGTTACTTGGTGTATCGGCCATTTGCTCGAACAAGTCGAACCTGACG CTTACGATGAGCGTTATAAAAAGTGGAATATGGCAGATTTACCAATTGTTCCGCAGCAATGGCAGCTCAGACCGAGGAAA AGCGCAAGTAAGCAATTAACAGTGATTCGTAAATTGCTCAAAGAAGCTAACGAAGTCATTCATGCAGGAGACCCAGATCG AGAGGGTCAGCTGTTAGTTGATGAAGTTCTGGACTATTGCAAGTTATCTAAAACCAAGAAGGAATCCACACAGCGTTTGC TGATTTCCGACTTGAACTTACCTGCGGTTAAACGCGCACTCAGTTCTATGCGCAGTAATCGCGAGTTTATCCCACTTTCA GTTTCTGCATTGGCCCGCTCTCGGGCTGATTGGCTGTATGGTATGAACATGTCTCGTGCTTATACCTTGCTTGGTCAAAA AGCAGGGTATCAAGGTGTTCTCTCGGTAGGGCGAGTGCAAACGCCAGTTCTTGGCTTAGTGGTGCGTCGTGATGAAGAAA TCGAAAACTTTGTCCCGAAGGACTATTTTACCCTACATGCTCTGATCCCATATCAAGATGCCAATGGTACTTTTGATATT CGTGCTCGTTGGAAGCCAAGTGAGGCATGCAAGCCTTGGCAGGACGAAGAAGGTCGAGTATTAAACCGTAAGTTGGTAGA AAATGTTGCAAACCGTATTGCAAATCAACCCGCAAAAGTGACAGAGTCGGAACAAAAGCAAACCAAGCAATCAGCACCAT TACCTTATTCGTTATCTGCTTTACAGATCGATGCCGCGAAGCGCTATGGTATGAGTGCGCAACAAGTACTAGATACTTGT CAGGCATTGTATGAAAAGCACAAGCTGATCACTTACCCGCGTTCAGATTGTCGCTATTTGCCGATGGAACACTACTCACA AGCAGGGACGGTGACAACTGCTATTGCGAATAACGCAAAAGAGTTGCAAGTTGCCGTTCAGGGAGCAGACTTAACATTAA AGTCCAAAGCCTGGAACGATAAAAAAGTGGATGCACACCATGCGATTATCCCTACACCGAAGCAAGCTAATGTGAATGCG CTTTCAGGCAATGAGATGAAAGTGTATCAATTGATTGCGCGCCAGTACCTCATGCAGTTCTATCCGGCGGCGGTTTACGC AGAAGCGAAATTGGTTTTCGATATCGCTGGTGGTACGTTTGTCGCGAAAGGTCGTCAGTTAGTTTCGCCGGGTTGGAAAG CGCTAATGGGCAAAACTGACAAGGAAGATGAAGGTATTGATGCCGTGCCACCGCTACCCGAAGGCACCGTGTTAACTTGT CGTGAAGGGGAAATAAAAGACCGAAAAACCGAGCCACCAAAGCATTTTACCGAGGCATCGCTGTTGCAAGCGATGACCGG GATCGCCCGTTATGTTGCGGATAAAGAACTGAAAAAAATCCTTCGTGACACTGATGGGCTAGGCACGGAAGCGACTCGCG CTGGTATTTTGGACACGCTGTTCAAACGCCAACTGCTTACGCGTCAAGGTAAGTCAATTCTCAGTTCTCCTGCGGGAAGA GGTCTCATTCATGCCTTGCCAGAAGATTCAACATACCCTGATATGACGGCTCATTGGGAGCACCAGTTACAAGGTATGGC AGAGAGAAATCAAGCATATCAGCCGTTCATGCAAGCACTGGAACAACGCATTGATAGCTTGATGGCACAAGTAAAAGCAG GCCCTATCCCTGATTCATTACGTCATTTACCCAAGGTGGAACGTCCTGCGTTTAAACGTAAAAAGCGCAGTTATTCAAAG AATGGTGGCGCGACTAAATCTCGTGCAACCAAAGGTAAGCAGGCATAG Protein sequence : MSRLFIAEKPSLGRAIAAALPNPQKKDQGFIRCGNGDIVTWCIGHLLEQVEPDAYDERYKKWNMADLPIVPQQWQLRPRK SASKQLTVIRKLLKEANEVIHAGDPDREGQLLVDEVLDYCKLSKTKKESTQRLLISDLNLPAVKRALSSMRSNREFIPLS VSALARSRADWLYGMNMSRAYTLLGQKAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVPKDYFTLHALIPYQDANGTFDI RARWKPSEACKPWQDEEGRVLNRKLVENVANRIANQPAKVTESEQKQTKQSAPLPYSLSALQIDAAKRYGMSAQQVLDTC QALYEKHKLITYPRSDCRYLPMEHYSQAGTVTTAIANNAKELQVAVQGADLTLKSKAWNDKKVDAHHAIIPTPKQANVNA LSGNEMKVYQLIARQYLMQFYPAAVYAEAKLVFDIAGGTFVAKGRQLVSPGWKALMGKTDKEDEGIDAVPPLPEGTVLTC REGEIKDRKTEPPKHFTEASLLQAMTGIARYVADKELKKILRDTDGLGTEATRAGILDTLFKRQLLTRQGKSILSSPAGR GLIHALPEDSTYPDMTAHWEHQLQGMAERNQAYQPFMQALEQRIDSLMAQVKAGPIPDSLRHLPKVERPAFKRKKRSYSK NGGATKSRATKGKQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-118 | 42 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 3e-118 | 42 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-118 | 42 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 8e-112 | 41 |
