Gene Information

Name : G157_00465 (G157_00465)
Accession : YP_008532828.1
Strain : Campylobacter coli CVM N29710
Genome accession: NC_022347
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 107917 - 108564 bp
Length : 648 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGAAAGAACTTATACAAATTAAAAATTTAAGTAAAGAATTTGGTAAAGTAAAAGCACTGGATAATATAAATTTAAATAT
TTACAAAGGAGAATGGCTTGCCATCATGGGTCCTTCTGGAAGTGGAAAATCAACGCTTTTAAATATATTATCTCTTATGG
ATGATCCAAGCAGTGGTAAATACATTTTAGATAATGAAGATTTAGAACAAATAAATGAAGAGCAAAAAATCACTTTGCGC
CGAGAAAAAATCGGGCTTATTTTTCAGCAATTTCATCTCATTCCTTATCTTAGTGCCTTAGAAAATGTTATGCTTTCGCA
ATACTATCATTCTAGCGTAGATGAAGAGGATGCAAAAGCTGTACTTGAAAAAGTAGGGCTTTCACATCGCCTTAGCCATT
TACCAAGCCAACTAAGCGGTGGAGAGCAACAAAGAGTTTGTATAGCAAGAGCATTGATTAACAATCCTGAAATTTTACTT
GCTGACGAGCCTACAGGGAATTTGGATGAAGCCAATGAAAAAATCGTTCTTGAAACCTTGCAAAAATTAAAAAATGAGGG
TAAAACCATAGTCTTGATCACACACAATCCCGAATTAGCAAAATTTGCAGATCGCACCCTTATCTTGCAACATGGAATTT
TAAAATGA

Protein sequence : 
MKELIQIKNLSKEFGKVKALDNINLNIYKGEWLAIMGPSGSGKSTLLNILSLMDDPSSGKYILDNEDLEQINEEQKITLR
REKIGLIFQQFHLIPYLSALENVMLSQYYHSSVDEEDAKAVLEKVGLSHRLSHLPSQLSGGEQQRVCIARALINNPEILL
ADEPTGNLDEANEKIVLETLQKLKNEGKTIVLITHNPELAKFADRTLILQHGILK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 5e-31 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
G157_00465 YP_008532828.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-45 46
G157_00465 YP_008532828.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 8e-33 44
G157_00465 YP_008532828.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-33 44
G157_00465 YP_008532828.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-35 43
G157_00465 YP_008532828.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-36 43
G157_00465 YP_008532828.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 1e-28 42