Gene Information

Name : G157_03315 (G157_03315)
Accession : YP_008533371.1
Strain : Campylobacter coli CVM N29710
Genome accession: NC_022347
Putative virulence/resistance : Virulence
Product : galactosyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 667150 - 667752 bp
Length : 603 bp
Strand : +
Note : COG2148 Sugar transferases involved in lipopolysaccharide synthesis

DNA sequence : 
ATGTATGAGAAATGGATAAAAAGAATTTTTGATTTTGTTTTGGCTTTGTTTCTTTTGGTGCTTTTTTCGCCTCTTATTTT
AATCACTGCTTTGCTTTTAAAAATAACTCAAGGTAGTGTGATTTTTACTCAAAATCGTCCAGGTTTAAATGAAAAAATTT
TTAAAATTTATAAATTTAAAACCATGAGTGATGAAAGAGATGAAAAGGGCGAGCTCTTAAGTGATGAGTTGCGTTTGAAG
GCTTTTGGGAAGATTGTTAGAAGTTTAAGCTTAGATGAGCTTTTACAGCTTTTTAATGTATTAAAGGGTGATATGAGTTT
TGTGGGTCCAAGACCTCTTTTAGTAGAATACTTACCCCTTTACAATGAAGAGCAAAAACTCCGCCATAAAGTGCGTCCTG
GTATCACAGGATGGGCACAGGTAAATGGTAGAAATGCGATTTCTTGGCAAAAAAAATTTGAACTTGATGTGTATTATGTA
AAAAATATTTCTTTTCTACTAGATTTAAAAATCATGTTCTTAACAGCCTTAAAGGTTTTAAAAAGAAGCGGAGTAAGCAA
AGAAGGTCATGTTACAACGGAGAAATTTAATGGCAAGAACTGA

Protein sequence : 
MYEKWIKRIFDFVLALFLLVLFSPLILITALLLKITQGSVIFTQNRPGLNEKIFKIYKFKTMSDERDEKGELLSDELRLK
AFGKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLPLYNEEQKLRHKVRPGITGWAQVNGRNAISWQKKFELDVYYV
KNISFLLDLKIMFLTALKVLKRSGVSKEGHVTTEKFNGKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 4e-23 43
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 5e-24 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
G157_03315 YP_008533371.1 galactosyltransferase VFG1369 Protein 2e-21 42
G157_03315 YP_008533371.1 galactosyltransferase VFG1309 Protein 8e-24 41