Gene Information

Name : actP (G157_00040)
Accession : YP_008532743.1
Strain : Campylobacter coli CVM N29710
Genome accession: NC_022347
Putative virulence/resistance : Resistance
Product : acetate permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 7291 - 8937 bp
Length : 1647 bp
Strand : -
Note : COG4147 Predicted symporter

DNA sequence :
ATGAAAGTCTTTATATTTTTAAGTTTAATCTTTAATTTAGCCTTAAGCGCCGGTTTTGATCTAGGAGAAGTTCATCAAAA
ACCTATAAATATAACTGCTGTTAGTATGTTTTTAGTCTTTGTTTTAGCTACTTTGTTTATCACCTATTATTCTAACAAAA
AATCCAAATCCAAAAGTGGATTTTATACCGCCGGAGGAAATATCACAGGAATGCAAAATGGTGTAGCTATAGCGGGGGAT
TATATGAGTGCGGCAAGCTTTCTTGGAATTACCGCTTTAGTTTTTACTAATGGCTTTGATGGGCTTATTTATTCTATAGG
ATTTTTAGTGGGTTGGCCTATTATTTTATTTTTAATTGCAGAAAAATTTAGAAATCTTGGCAAATTTACCTTTGCAGATA
TTACCGCTTATCGTTTAGAAGCTAAGCCTATACGCGTTATATCAGCTATTTCTGCTTTAAGCGTTATTATCTTTTATCTT
ATTGCTCAAATGGTAGGAGCAGGACAACTCATACAATTGCTTTTTGGTTTACCTTACACTTTTGCGGTTGTTTTGGTCGG
AATTTTAATGATTTGTTATGTAACCTTTGGAGGAATGCACGCAACCACTTGGGTGCAAATCATCAAAGCCATTTTACTTC
TAGCAGGGGCTACTTTTATGGCTGTTATGATTTTATACCTTACGAAATTTGATTTAAAATATTATTTTGATTTAGCCATT
TCTCATCATCCAAAAGGTGAAAACATAATGAAACCAGGGACTTTTTTGCCTGATACCGTATCAGCTCTTTCTTTAGGCTT
GGCTCTTATGTTTGGAACTGCGGGTTTACCTCATATACTTATCCGATTTTTTACCGTAAAAGATGCTAAAGAAGCTAGAA
AGTCAGTATTTTATGCAACAGGATTTATAGGGTATTTTTACATACTTACTTTCATCATAGGCTTTGGTGCTATAGCGCTC
TTACTTGGTAATCCTCAATTTACTAACGCTGATGGAAGTTTTAATGGGGCTAGTAATATGATAGCAGTTACCTTAGCTGA
TGTTTTGGGTGGAGATGTCTTTTTAGGATTTATTTCAGCAGTAGCTTTTGCTACTATTTTAGCAGTCGTTGCAGGACTTG
CGATTTCAGGTGCAGGAGCTATAAGTCATGATTTATATGTCAATGTTATCAAAAAAGGTGATGTCAAACATGAAGATGAA
ATGAGAGTTACAAAAATCGCAACTATAGCTATAGGAATTTTTGCTATTTTGCTAGGCATTGTCTTTGAAAAACAAAATGT
TGCTTTTACCGTAGGACTTGCTTTTGCTATTGCTGCGAGTGTAAATTTTCCTATACTTTTACTCTGTATTTATTGGAAAA
ATCTTACCACTAAAGGCGCTTTTTGGGGTGGACTTATAGGACTTATAGTCGTTCTTGCTCTTGTGATTTTAAGCCCTAGT
ATATGGGTAAAAAGTTTTGGTTTTAGTGAAGCTATTTTTCCTTATGATCATCCTGCTTTATTTTCAATGCCTTTAAGTTT
TATACTCATTTATATCATTTCAAAATTGGATAATTCTAAAAGAGCTAAAAAAGATAAAGAAGGTTTTGAAGCACAAGATT
TTAGAGCTCAAAGCGGTGTGGGAGTAAGTGAAGCTGTGGCGCATTAA

Protein sequence :
MKVFIFLSLIFNLALSAGFDLGEVHQKPINITAVSMFLVFVLATLFITYYSNKKSKSKSGFYTAGGNITGMQNGVAIAGD
YMSAASFLGITALVFTNGFDGLIYSIGFLVGWPIILFLIAEKFRNLGKFTFADITAYRLEAKPIRVISAISALSVIIFYL
IAQMVGAGQLIQLLFGLPYTFAVVLVGILMICYVTFGGMHATTWVQIIKAILLLAGATFMAVMILYLTKFDLKYYFDLAI
SHHPKGENIMKPGTFLPDTVSALSLGLALMFGTAGLPHILIRFFTVKDAKEARKSVFYATGFIGYFYILTFIIGFGAIAL
LLGNPQFTNADGSFNGASNMIAVTLADVLGGDVFLGFISAVAFATILAVVAGLAISGAGAISHDLYVNVIKKGDVKHEDE
MRVTKIATIAIGIFAILLGIVFEKQNVAFTVGLAFAIAASVNFPILLLCIYWKNLTTKGAFWGGLIGLIVVLALVILSPS
IWVKSFGFSEAIFPYDHPALFSMPLSFILIYIISKLDNSKRAKKDKEGFEAQDFRAQSGVGVSEAVAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 8e-114 53
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 7e-67 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
actP YP_008532743.1 acetate permease BAC0564 Protein 5e-132 63
actP YP_008532743.1 acetate permease BAC0570 Protein 8e-128 61