|
Name : G157_01665 (G157_01665) Accession : YP_008533057.1 Strain : Campylobacter coli CVM N29710 Genome accession: NC_022347 Putative virulence/resistance : Virulence Product : arabinose-5-phosphate isomerase Function : - COG functional category : - COG ID : - EC number : - Position : 334549 - 335502 bp Length : 954 bp Strand : + Note : COG0794 Predicted sugar phosphate isomerase involved in capsule formation DNA sequence : ATGAAAATTGATGCTTTAAAGATAGCTAAAGAAGTTTTTGCGACAGAGGCTAAGGCTATAGAGGATTTGGCTTTAAATTT GGATGAAAATTTTTCTAAAGCCATAGAACTTATGCTTCATACAAAGGGGCGTTGCATAGTCAGTGGCATGGGAAAATCGG GCCATATAGGAGCTAAGATAGCTGCGACTTTAGCAAGCACAGGAACTCCAAGCTTTTTTATCCATCCTGGAGAGGCTTTA CATGGAGATCTTGGGATGCTTACGCCTGATGATGTTTTGATAGCTATCTCAAACTCAGGTGAAACTGAAGAGATTTTAAA AATCATCCCTGCGATTAAAAAACGTAAAATCCCTCTGATAGCTATGTGCGGAAAGGAAAATTCTACCCTTGTAAAACAAG GGGATATTTTTTTAAATATATCCATAAAAGAAGAAGCATGTCCTTTGCAACTTGCTCCGATGTCTTCGACAACTGCTACT TTGGTAATGGGTGATGCTTTAGCAGCAGCTTTGATGAAGGCTAGAAATTTTAGACCCGATGACTTTGCTCTTTTTCATCC AGGTGGAAGCTTAGGCAGAAAGCTTTTAACTAGAGTAAGCGATCTGATGGTATCGAAAAATCTTCCTATAGTTCATCCTG ATACCGAATTTAACGATCTTGTTGATGTGATGACCAGTGGAAAATTAGGACTTTGTTTGGTGCTTGAAAATGAAAAGCTA GTAGGTATTATAACCGATGGGGATTTGCGCCGTGCTTTAAAGGCTAATGATAAACCTAGATTTGATTTCAAAGCTAAAGA GATCATGAGTATAAATCCTAAAGTGGTCGATGCTGATGCTATGGCAAGTGAGGCAGAAGAGATTATGTTAAAGTATAAAA TCAAAGAAATTGTCGTTTCCAAAGAAGATAAAGTAGTAGGCATCATACAGCTCTATGCGATAGGGAATGTGTAG Protein sequence : MKIDALKIAKEVFATEAKAIEDLALNLDENFSKAIELMLHTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEAL HGDLGMLTPDDVLIAISNSGETEEILKIIPAIKKRKIPLIAMCGKENSTLVKQGDIFLNISIKEEACPLQLAPMSSTTAT LVMGDALAAALMKARNFRPDDFALFHPGGSLGRKLLTRVSDLMVSKNLPIVHPDTEFNDLVDVMTSGKLGLCLVLENEKL VGIITDGDLRRALKANDKPRFDFKAKEIMSINPKVVDADAMASEAEEIMLKYKIKEIVVSKEDKVVGIIQLYAIGNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-56 | 47 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 6e-57 | 47 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-56 | 47 |
