Gene Information

Name : G157_01650 (G157_01650)
Accession : YP_008533054.1
Strain : Campylobacter coli CVM N29710
Genome accession: NC_022347
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 331118 - 331780 bp
Length : 663 bp
Strand : +
Note : COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component

DNA sequence : 
ATGATAAAAGTTTTAAATTTAACCAAATCTTATCCTTTATTTAATGGCGGAAGGCATTATGTTTTTAAAGATTTTACTTT
TGAATTTCCTGAAAATTGTAGTATAGGTTTAATGGGTAGAAATGGTGCAGGAAAATCAACTTTAATGAAGCTTTTAAGTG
GCTCTGAGCTTCCCGATAGAGGAAAAATCATTACCAATAAAAAATTTTCTTGGCCCTTGGGGCTAAGCGGAGCTTTTCAA
GGATCCTTAACAGCTAGAGATAATGCTAAATTTGTAGCTAGGGTTTATGGCTATAAGGGTGAAGAGCTTTACGAAAAAGT
TAAATTTGTAGAAGATTTTGCAGAGCTTGGCAAATTTTTTGATGAGCCCATGAATACTTATTCTTCGGGTATGAGTGCTA
GGATAGCTTTTGGGCTTAGCATGGCTTTTGATTTTGATTATTATCTAATCGATGAGGCAGGAGCTGTAGGAGATCCTAAA
TTTAGAGAAAAAAGCCATAAATTATATAAAGAAAGATTAAGTCAATCTAAAGTAATCATGGTTTCACACAATGTGGCTGA
AATTAAAGAATGGTGTGATAAAATTATCTTTATGGAAAATGGAAAAGCTACGGTTTACGATGATGTAGATGAGGGCATAG
CTGTCTATCAAGGAAAAAAATAA

Protein sequence : 
MIKVLNLTKSYPLFNGGRHYVFKDFTFEFPENCSIGLMGRNGAGKSTLMKLLSGSELPDRGKIITNKKFSWPLGLSGAFQ
GSLTARDNAKFVARVYGYKGEELYEKVKFVEDFAELGKFFDEPMNTYSSGMSARIAFGLSMAFDFDYYLIDEAGAVGDPK
FREKSHKLYKERLSQSKVIMVSHNVAEIKEWCDKIIFMENGKATVYDDVDEGIAVYQGKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 3e-56 56
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 6e-57 55
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 4e-38 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
G157_01650 YP_008533054.1 capsule polysaccharide export ATP-binding protein VFG1449 Protein 9e-57 56
G157_01650 YP_008533054.1 capsule polysaccharide export ATP-binding protein VFG0696 Protein 1e-39 44
G157_01650 YP_008533054.1 capsule polysaccharide export ATP-binding protein VFG0258 Protein 2e-38 44
G157_01650 YP_008533054.1 capsule polysaccharide export ATP-binding protein VFG2563 Protein 1e-37 41