Gene Information

Name : fliQ (G157_08250)
Accession : YP_008534317.1
Strain : Campylobacter coli CVM N29710
Genome accession: NC_022347
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliQ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1629540 - 1629809 bp
Length : 270 bp
Strand : +
Note : COG1987 Flagellar biosynthesis pathway, component FliQ

DNA sequence :
ATGGATGAAAGCACCTTGGTTGCTCTTGGAGTGCAAACCTTTAAAATCACACTTTTGCTTTCTTTGCCCATGCTTTTAGC
GGGGCTTATCGCGGGGCTTATTATCAGTATCTTTCAGGCTACAACACAAATTAATGAAATGACGCTTTCTTTTGTGCCTA
AAATCATCTTAGTAGTAATAGTCATCATCTTTTTAATGCCTTGGATGACTACGACAATGATTGATTTTACCGAAAATATT
TTAAATCAAATTCCAACTTTTATCAAATGA

Protein sequence :
MDESTLVALGVQTFKITLLLSLPMLLAGLIAGLIISIFQATTQINEMTLSFVPKIILVVIVIIFLMPWMTTTMIDFTENI
LNQIPTFIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escS YP_003236102.1 T3SS structure protein EscS Virulence LEE Protein 0.028 45
escS NP_290282.1 hypothetical protein Virulence LEE Protein 0.028 45
ECs4582 NP_312609.1 EscS Virulence LEE Protein 0.028 45
escS AAC38370.1 EscS Virulence LEE Protein 0.020 45
escS AAC31527.1 L0048 Virulence LEE Protein 0.020 45
escS ACU09472.1 hypothetical protein Not tested LEE Protein 0.020 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliQ YP_008534317.1 flagellar biosynthesis protein FliQ VFG2339 Protein 6e-06 48
fliQ YP_008534317.1 flagellar biosynthesis protein FliQ VFG0826 Protein 0.008 45
fliQ YP_008534317.1 flagellar biosynthesis protein FliQ VFG0716 Protein 0.008 45