Gene Information

Name : fliI (G157_07950)
Accession : YP_008534259.1
Strain : Campylobacter coli CVM N29710
Genome accession: NC_022347
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.14
Position : 1577860 - 1579245 bp
Length : 1386 bp
Strand : +
Note : COG1157 Flagellar biosynthesis/type III secretory pathway ATPase

DNA sequence : 
ATGAATTTAGAAAAACTTCGTTCTAAGCTTGGCAAAGAAAATTTAAGTGCTGTTTTTGGAGAGATCACTAAAATTTCTGC
TACAAGTATAGAAATTCGAGGACTTAAAACGGGTGTGGGTGACATCATTAAACTTGTTTCAAATGAAAATGAAAATTTAA
ACACCTTAGCTATGGTTGTTGAAATTAAAGAGCAATTTAGCTATCTAAGTCCTTTTTCTTTCATAGAAGGTTTTAAAATA
GGCGACCGCGCTTTTATAAGTGATGCAGGAATGCAAATAGGCGTTAGTGATGAGCTTTTAGGAAGAGTGGTGGATCCTTT
TATGCGCCCTAAAGATGGCAAGGGTGCTATAGAGGCGACTAAATATATGCCTATCATGCGTGCACCTATTGATGCGATGA
AAAGAGGACTTATAGAAGAGGTTTTTCCTGTGGGAGTTAAAACCATAGACGCGCTTTTAACTTGTGGCGTGGGGCAAAAA
TTAGGCATTTTTGCAGGAAGTGGCGTAGGAAAATCTACTCTTATGGGTATGATAGTTAAAAATTCAAAAGCTCCTATCAA
AGTAGTCGCACTTATAGGCGAAAGAGGGCGCGAAATTCCTGAATTTATACAAAAAAATTTAGGTGGAAAGCTTGATGATA
CGGTAATTATCGTTGCAACAAGTGATGATAGTGCTTTAATGCGAAAATATGGAGCATTTTGCGCTATGAGCGTGGCCGAA
TATTTTAAAGAACAAGGCAAAGATGTACTTTTTATCATGGATAGCGTAACGCGGTTTGCCATGGCACAAAGAGAGATAGG
ACTTGCCCTTGGCGAACCTCCTACTACAAAAGGCTATCCTCCAAGTGTTTTAAGTCTTTTGCCTCAGCTCATGGAAAGAA
CGGGAAAAGAAGAAGGTAAAGGAACCATAACGGCGTTTTTTACTGTTTTGGTTGATGGAGATGATATGAGTGATCCTATC
GCCGATCAAAGTCGTTCTATCTTAGATGGGCATATTGTTTTAAGTCGTGAGCTTACGGATTTTGGAATTTATCCTCCTAT
TAATATACAAAATTCAGCCTCAAGGGTAATGGGCGATATCATAAGTCCTGAACACAAACTTTGGGCTAGAAAATTTAAAC
GCTTAAATTCGCTTTTGAAAGAAAATGAAGTATTACTTCGTATCGGTGCTTATCAAAAGGGTAGTGATAAGGAGCTTGAT
GAAGCTATAGCTAAAAAGGAATTTATGCAAAAATTTTTAGGACAAAATCCCGAAGAAAGCTTTGAATTTGAAGAAACTAT
AGGACTTTTAAGTCAAATTGATGCTAATGTTGCCCCTAGTGCAGTGCAGCAAAATATCAATATGGGAAGTTCTAACGCAA
CACTACCTAATCCTAATCTTAAATAA

Protein sequence : 
MNLEKLRSKLGKENLSAVFGEITKISATSIEIRGLKTGVGDIIKLVSNENENLNTLAMVVEIKEQFSYLSPFSFIEGFKI
GDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGAIEATKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQK
LGIFAGSGVGKSTLMGMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCAMSVAE
YFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTGKEEGKGTITAFFTVLVDGDDMSDPI
ADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRVMGDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELD
EAIAKKEFMQKFLGQNPEESFEFEETIGLLSQIDANVAPSAVQQNINMGSSNATLPNPNLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-78 47
escN AAK26715.1 EscN Virulence LEE Protein 1e-78 46
escN AAL57542.1 EscN Virulence LEE Protein 1e-78 46
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-78 46
escN CAI43874.1 EscN protein Virulence LEE Protein 6e-79 46
escN YP_003223475.1 translocator EscN Virulence LEE Protein 8e-79 46
escN CAC81862.1 EscN protein Virulence LEE II Protein 6e-79 46
escN YP_003236088.1 translocator EscN Virulence LEE Protein 3e-79 46
escN NP_290268.1 hypothetical protein Virulence LEE Protein 3e-79 46
escN AAC31513.1 L0034 Virulence LEE Protein 2e-79 46
ECs4568 NP_312595.1 EscN Virulence LEE Protein 3e-79 46
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-79 46
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 8e-74 46
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 8e-74 46
lscN AAO18044.1 LscN Virulence TTSS locus Protein 3e-84 45
escN AAC38383.1 EscN Virulence LEE Protein 4e-79 45
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-67 43
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 4e-81 42
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-81 42
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-81 42
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-67 42
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 3e-67 42
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-66 42
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-66 42
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-80 42
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 1e-81 42
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 1e-81 42
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-81 42
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-80 42
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-80 42
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 5e-72 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_008534259.1 flagellum-specific ATP synthase VFG0812 Protein 1e-79 46
fliI YP_008534259.1 flagellum-specific ATP synthase VFG0390 Protein 9e-87 45
fliI YP_008534259.1 flagellum-specific ATP synthase VFG0192 Protein 2e-84 45
fliI YP_008534259.1 flagellum-specific ATP synthase VFG0048 Protein 9e-81 45
fliI YP_008534259.1 flagellum-specific ATP synthase VFG0730 Protein 3e-79 45
fliI YP_008534259.1 flagellum-specific ATP synthase VFG2331 Protein 7e-76 44
fliI YP_008534259.1 flagellum-specific ATP synthase VFG1254 Protein 3e-78 44
fliI YP_008534259.1 flagellum-specific ATP synthase VFG2144 Protein 2e-78 42
fliI YP_008534259.1 flagellum-specific ATP synthase VFG0515 Protein 2e-67 42
fliI YP_008534259.1 flagellum-specific ATP synthase VFG2499 Protein 4e-75 42
fliI YP_008534259.1 flagellum-specific ATP synthase VFG1008 Protein 7e-59 41