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Name : lysS (G157_06635) Accession : YP_008534011.1 Strain : Campylobacter coli CVM N29710 Genome accession: NC_022347 Putative virulence/resistance : Virulence Product : lysyl-tRNA ligase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1341059 - 1342567 bp Length : 1509 bp Strand : - Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGTTTGACAATATTTTAGAACAACAAAGAATTCAAAAGGCTAATGAGCTTAAAAACGCAGGATTAAATCCTTATCCACA TTTTTTAGTTAAAGAACTTTCTCTAGCAGATTTTAAAAAGAAATTTAGCTATATTTTTGATACTGAAAATAAACGCGATG AAAGTATTTCTTCTATCGTTTCTGGACGCTTAAAGCTCCTTAGAATTGCTGGTAAATCTATATTTGCTAATATAGAAGAT GAGAATGAGAATTTGCAAATTTATTTTAGTAAAGATTCTTTAGGTGAGGAAAAATTTAATTTATTCAAAAAAAATCTTGA AGTGGGTGATATCATCCTTGCAAAAGGCTTCCCTTTTGTTACTAAAACGGGAGAGTTTAGCTTGCACGCAAGTGAGATCA CTTTAGCAACTAAATCAATAGTACCTTTGCCTGAAAAATATCATGGACTTACAGATATAGAACAAAGATATCGTAAGCGT TATGTAGATATGATTATGAATGCAGAGGTTAGAAAAGATTTTCTGGTTCGTTCTAAAGTTGTAAGTTTGATTCGTCATTT TTTTGAAGAAAAAGGCTTTTTAGAGGTTGAAACTCCTATGATGCACCCCATTGCAGGCGGAGCAAATGCTAAGCCCTTTG TAACTTTTCATAATTCTTTAGGGGTTGAGAGATTTTTAAGAATTGCGCCTGAGCTTTATTTAAAAAGACTTGTAGTGGGT GGTTTTGAGGCAGTTTTTGAAATCAATCGTTGTTTTAGAAATGAAGGAATGGATCTCACTCATAACCCTGAATTTACTAC AATTGAGTTTTATTGGGCTTATCATAATTATAAAGATTTAATGGATCTTACTGAAGAACTTTTTGCCTTGCTTTTAAAAA AATTGCGATTAGGAAAAATCATAGAATTTGATGGACAAAAAATCGATTTTTCCAAACCTTTTGAGAGAATTACTTATAAA GATGCGCTTAAAAAGTATGGTGCTTTAAGCGATGAAATTATTGAAAATAAAGATAAGATTTTAGAGAAATTAAAAAAAGA TGGCTTTGAAGCAAATGATAAGCTTGACTTAGGGCATTTGCAAGCCGAGCTTTTCGATAATTATGTAGAGAGTAAACTTA TTGATCCTACTTTTATCACAGATTTTCCAATATCTATTAGCCCACTTTCTCGTCGTAGTGACAAAAATTCTGAGATAGCA GAGCGCTTTGAGCTTTTTGTGTGTGGTAGAGAATTAGCCAATGGTTTTAACGAATTAAATGATCCTTTGGATCAATATGA AAGATTTTTAAAACAAATTGAGGCTAAAAATGCAGGTGATGAAGAAGCGTGTGAAATGGATGAAGATTTTGTAAATGCTT TAGGATATGGTATGCCACCAACAGCAGGACAAGGTATAGGAATAGATAGATTAGTGATGCTTTTAACAAATAAAAAATCT ATTCGAGATGTGATATTGTTTCCAGCTATGAGGCCATTGAAATCAGAATTAAAGGAGGATAAAGAATGA Protein sequence : MFDNILEQQRIQKANELKNAGLNPYPHFLVKELSLADFKKKFSYIFDTENKRDESISSIVSGRLKLLRIAGKSIFANIED ENENLQIYFSKDSLGEEKFNLFKKNLEVGDIILAKGFPFVTKTGEFSLHASEITLATKSIVPLPEKYHGLTDIEQRYRKR YVDMIMNAEVRKDFLVRSKVVSLIRHFFEEKGFLEVETPMMHPIAGGANAKPFVTFHNSLGVERFLRIAPELYLKRLVVG GFEAVFEINRCFRNEGMDLTHNPEFTTIEFYWAYHNYKDLMDLTEELFALLLKKLRLGKIIEFDGQKIDFSKPFERITYK DALKKYGALSDEIIENKDKILEKLKKDGFEANDKLDLGHLQAELFDNYVESKLIDPTFITDFPISISPLSRRSDKNSEIA ERFELFVCGRELANGFNELNDPLDQYERFLKQIEAKNAGDEEACEMDEDFVNALGYGMPPTAGQGIGIDRLVMLLTNKKS IRDVILFPAMRPLKSELKEDKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-101 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_008534011.1 | lysyl-tRNA ligase | VFG1668 | Protein | 2e-101 | 49 |
