Gene Information

Name : M892_04625 (M892_04625)
Accession : YP_008525704.1
Strain :
Genome accession: NC_022269
Putative virulence/resistance : Virulence
Product : T3SS/export protein VscI1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1012608 - 1012952 bp
Length : 345 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :

ATGATCAATACGCAGTACACCGAAGTCATGCAGACGAATCTAGAGCAAGTGCAAGATGCGCAAGCTCAGAATGGGCTTAG
AGAACGTTTCGAGCAAGCGATGTTGGCCCCGGAAGGAAACAATGGTTTAGAAGGTGGTTTGTTAGAAAACATTAGCGAAC
TGAAAAATACCATCGATAACGCAAAAAGCAGCTTAACCGACAGTATGAAAATGGTAGGTGACGATCCTGCTCAGCTTTTG
CAAATGCAATGGGCGTTGACTCGAATTACCTTTCAAGAGGAGCTGATCGCCAAGACGGTAGGTAAAACGACGCAAAACGT
AGAAACACTGTTAAAGGCACAGTAG

Protein sequence :

MINTQYTEVMQTNLEQVQDAQAQNGLRERFEQAMLAPEGNNGLEGGLLENISELKNTIDNAKSSLTDSMKMVGDDPAQLL
QMQWALTRITFQEELIAKTVGKTTQNVETLLKAQ

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
lscI	AAO18028.1	LscI	Virulence	TTSS locus	Protein	1e-14	43

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
M892_04625	YP_008525704.1	T3SS/export protein VscI1	VFG0408	Protein	5e-12	42