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Name : M892_04620 (M892_04620) Accession : YP_008525703.1 Strain : Genome accession: NC_022269 Putative virulence/resistance : Virulence Product : T3SS/putative apparatus lipoprotein VscJ1 Function : - COG functional category : - COG ID : - EC number : - Position : 1011844 - 1012575 bp Length : 732 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGCGTGCAGTAAGCATGTTACTGGTTCTATTTTTGGTGGGTTGTCAGACCGAACTTTACACCGGTGTGAGCCAGAAAGA AGGCAACGAAATGTTGTCAATCTTACTTTCTGAAGGCGTCGTCGCCACCAAAGAACCGGATAAAGACAACACCGTCAAGC TGATGGTAGATAACGCACAAATTGCGTTTGCGGTTGATGCGCTTAAGCGCAAAGGTTACCCAAGAGAGCAGTTCTCGACA CTTAAAGAAGTCTTCCCGAAAGACGACCTGATTTCGTCTCCGCTTGCTGAGCGAGCAAGACTTATTTACGCGAAATCGCA AGAGCTGTCGTCCACATTGTCACAAATTGATGGTGTGTTGGTCGCTCGCGTTCACGTGGTACTTGAAGACCAAAATCTTC GTCCTGGTGAGCGCCCAACGCCAGCATCGGCATCTGTGTTTATCAAACATGCCGCGGATGTCGCGTTGGACTCTTATGTC CCTCAGATTAAGCTGTTAGTAAACAACAGTATCGAAGGGTTGAACTACGATCGTATTAGCGTGGTGATGGTGCCATCTTC GGAAGTTCGCGTGACTTCTCAAGGTAATCAATTCGAAAGCATTCTATCGATTCAAGTGACCAAAGACACCGCAAGCCATC TGATTGCTATCCTTGTTTTCTTGGTACTGCTGATCATTGGCTCTAACGCAGCAACGTTTGCTTGGTGCCGCAGGAACGTG AAACGTGGTTAA Protein sequence : MRAVSMLLVLFLVGCQTELYTGVSQKEGNEMLSILLSEGVVATKEPDKDNTVKLMVDNAQIAFAVDALKRKGYPREQFST LKEVFPKDDLISSPLAERARLIYAKSQELSSTLSQIDGVLVARVHVVLEDQNLRPGERPTPASASVFIKHAADVALDSYV PQIKLLVNNSIEGLNYDRISVVMVPSSEVRVTSQGNQFESILSIQVTKDTASHLIAILVFLVLLIIGSNAATFAWCRRNV KRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscJ | AAO18027.1 | LscJ | Virulence | TTSS locus | Protein | 1e-64 | 60 |
| hrcJ | NP_791211.1 | type III secretion protein HrcJ | Virulence | Hrp PAI | Protein | 2e-27 | 44 |
| hrpC | AAB00129.1 | HrpC | Virulence | Hrp PAI | Protein | 1e-27 | 44 |
| hrcJ | AAT96157.1 | HrcJ | Virulence | T-PAI | Protein | 7e-28 | 44 |
| hrcJ | AAT96211.1 | HrcJ | Virulence | T-PAI | Protein | 7e-28 | 44 |
| hrcJ | AAB49174.1 | HrcJ | Virulence | Hrp PAI | Protein | 9e-25 | 43 |
| hrcJ | AAB05080.1 | HrcJ | Virulence | Hrp PAI | Protein | 1e-29 | 42 |
| YPO0263 | YP_002345344.1 | type III secretion system apparatus lipoprotein | Virulence | Not named | Protein | 1e-35 | 42 |
| hrcJ | AAC35801.1 | putative hrp type III secretion pathway protein | Virulence | Hrp PAI | Protein | 6e-28 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| M892_04620 | YP_008525703.1 | T3SS/putative apparatus lipoprotein VscJ1 | VFG0218 | Protein | 3e-63 | 69 |
| M892_04620 | YP_008525703.1 | T3SS/putative apparatus lipoprotein VscJ1 | VFG0409 | Protein | 2e-64 | 60 |
| M892_04620 | YP_008525703.1 | T3SS/putative apparatus lipoprotein VscJ1 | VFG0051 | Protein | 2e-34 | 43 |
