Gene Information

Name : M892_04610 (M892_04610)
Accession : YP_008525701.1
Strain :
Genome accession: NC_022269
Putative virulence/resistance : Virulence
Product : T3SS/secretory pathway protein VscL1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1010572 - 1011207 bp
Length : 636 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGGTTTCATTTGTTGAAATAAAAACCGACAACTTGCAATTGGCGCCGGGCTTAAAAGTGCTCAAAGCAAAAGACTATGT
GAGTTACTTAGATTCGCAGCATTTGGTTGAGGCGGCGCACTCAAAAGCAGAAAGCATCATTGCGAAAGCGGACGAAGCCT
ATGAGCTAGAAAGGCAGCGAGGTTATCAGGACGGCATCTATCAAGCGAAGATCGAGAACGCCGAAACCATGCTGGCAACA
CTTGCTCGATGCAACGAGTACTATTTGCAGGTCGAGCAAAAAATGACAGGCGTTGTGCTCGATGCCGTCAGAAAGATCAT
CAACAGCTTTGATGATGTGGATACCACTGCAAGTGTCGTGAGAGAGGCGCTCCAGCTTGTCAGTAACCAAAAGCAAGTGA
TTCTGCATGTGCATCCAGAGCAGGTTACTGAAGTGCGGGAGAAGGTTTCCTCCATACTCAGTGATTTCCCTGAAGTGGGG
TACGTTGAAGTCATTGCCGATGCGCGTTTAAAAAACGGCGGCTGCATACTGGAGACCGAGATCGGTATTATCGATGCGAG
TATCGACGGTCAGCTGCAAGCGCTCAAGCAAGCTATTACCAAGCAATTGAGCGAACGCCAGCAGATACAGCCCTAA

Protein sequence : 
MVSFVEIKTDNLQLAPGLKVLKAKDYVSYLDSQHLVEAAHSKAESIIAKADEAYELERQRGYQDGIYQAKIENAETMLAT
LARCNEYYLQVEQKMTGVVLDAVRKIINSFDDVDTTASVVREALQLVSNQKQVILHVHPEQVTEVREKVSSILSDFPEVG
YVEVIADARLKNGGCILETEIGIIDASIDGQLQALKQAITKQLSERQQIQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18079.1 LscL Not tested TTSS locus Protein 9e-51 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M892_04610 YP_008525701.1 T3SS/secretory pathway protein VscL1 VFG0220 Protein 8e-52 52
M892_04610 YP_008525701.1 T3SS/secretory pathway protein VscL1 VFG0411 Protein 7e-49 52
M892_04610 YP_008525701.1 T3SS/secretory pathway protein VscL1 VFG0049 Protein 1e-32 42