Gene Information

Name : M892_04545 (M892_04545)
Accession : YP_008525688.1
Strain :
Genome accession: NC_022269
Putative virulence/resistance : Virulence
Product : T3SS/component VscT1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 995666 - 996448 bp
Length : 783 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGAGTTACGATGATTTGCACCAAGCCCTGTTCCTATACAGCTTGACGCTCCCTAGGTTAATGGCTTGCTTTATATTTTT
GCCGATCTTAAACAAACAAACGCTCGGTGGCACCTTGGTAAGAAATGGTGTTTTGTGTTCGCTTGCGCTGTTTATCTTCC
CAATGATTAACCAACAAGACCTGCCCGCAGAAACGGACGGGATTTGGTTGATGGTCATCTTAGGCAAAGAGGTACTATTG
GGTATGCTGATTGGCTTTGTTGCAGCAATCCCTTTTTGGGCTATTGAGGCGGCAGGGTTTCTAGTGGATAACCAACGTGG
TGCTGCGATGGCAAGTATGTTTAACCCCACTCTCGGCTCTCAGTCAACGCCAACGGCTGTGCTATTGACTCAAACCCTGA
TCACCTTGTTCTTCTCCGGTGGTGGCTTTGTCGCTTTTATTTATGCGCTGTTTAACAGCTATTCGTCGTGGCCTGTGATT
AGTTTTTTCCCAACCGTCACTGAGGAATGGGTGCGCTTTTTCTACGCTCAGTTCGAGCAACTTATGTGGCTTGGCGTTTT
GATGTCTGCGCCTTTGGTTTTAGCCATGTTCCTTGCCGAGTTTGGACTCGCGCTGATTAGCCGATTCGCCCCACAGCTGA
ACGTTTTCTCTTTAGCCATGCCGATCAAAAGTGCCATTGCCAGCGTGCTATTGATTGTTTATTTGGCATTGATGATGGAC
CACTTTCAAGCCCTTTTCTCTGACATCGTACTGTTCAGAGAACAGCTCAATACCATTTGGTAA

Protein sequence : 
MSYDDLHQALFLYSLTLPRLMACFIFLPILNKQTLGGTLVRNGVLCSLALFIFPMINQQDLPAETDGIWLMVILGKEVLL
GMLIGFVAAIPFWAIEAAGFLVDNQRGAAMASMFNPTLGSQSTPTAVLLTQTLITLFFSGGGFVAFIYALFNSYSSWPVI
SFFPTVTEEWVRFFYAQFEQLMWLGVLMSAPLVLAMFLAEFGLALISRFAPQLNVFSLAMPIKSAIASVLLIVYLALMMD
HFQALFSDIVLFREQLNTIW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscT AAO18038.1 LscT Virulence TTSS locus Protein 4e-66 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M892_04545 YP_008525688.1 T3SS/component VscT1 VFG0396 Protein 1e-69 65
M892_04545 YP_008525688.1 T3SS/component VscT1 VFG0186 Protein 2e-59 62