Gene Information

Name : M892_04465 (M892_04465)
Accession : YP_008525672.1
Strain :
Genome accession: NC_022269
Putative virulence/resistance : Virulence
Product : T3SS/low calcium response chaperone VcrH1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 983062 - 983553 bp
Length : 492 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGACTACACAAAACGCGCCAACTGACCCATCTCAAATGCAAGCAGAGGAACTCCTTTCATTTTTGGAAGAGGGGGGCAC
GCTAAAAATGCTGCACGATGTATCAGCAGACACCATCGAGCACATTTACGCGGTTGGATACAACTTTTTCCAGTCAGGAA
AAATAGAGCAGGCCGCTAAGGTATTTCAGCTGCTTAGCATGCTTGATCACTATCAAGCGCGATTTTTCATTGGTTTGGGC
GCGGCTCGTCAGGAACTGGGTGAGTACCTGCAGGCGCTTGACGCCTACAGCTACGCTGCGCTTGTGGACGTAAATGATCC
ACGCCCACCTTTCCACTCTGCAGAATGTCACCTCAAGCTTGAGCAACTGACGGAAGCAGAGAGTGGGTTTTACAGCGCGA
AGGAGATGTCTGCTGGGAAATCAGAGTATGCAGACTTGCATCAACGAGCAGGCATCATGTTAGAAGCGGTGAGAAACAAA
AGGAGTAACTAG

Protein sequence : 
MTTQNAPTDPSQMQAEELLSFLEEGGTLKMLHDVSADTIEHIYAVGYNFFQSGKIEQAAKVFQLLSMLDHYQARFFIGLG
AARQELGEYLQALDAYSYAALVDVNDPRPPFHSAECHLKLEQLTEAESGFYSAKEMSAGKSEYADLHQRAGIMLEAVRNK
RSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssH AAO18054.1 LssH Virulence TTSS locus Protein 5e-36 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M892_04465 YP_008525672.1 T3SS/low calcium response chaperone VcrH1 VFG0202 Protein 6e-39 55
M892_04465 YP_008525672.1 T3SS/low calcium response chaperone VcrH1 VFG0380 Protein 8e-37 52