Gene Information

Name : M892_15305 (M892_15305)
Accession : YP_008527727.1
Strain :
Genome accession: NC_022269
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3297569 - 3298438 bp
Length : 870 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGACAAAGGATAACTCAATCCGCCTGATGCTCAGCACCTTTGTGTTGCTGATTGGCGTACTGTTTTCTTCGTTTTCGTT
TGCTCAAGCAGAGGAATCCGCGCTTCCTGCTAATCTGGCTGAAGGCGACAGCGTGACAGTAAAAGCGATGGAGAACGAGT
CGAGTTCCAGCCGCAGCATGTCGGTGGGCAATGGTGGAGGCATTCCCGCTTTCACCATGACGACCAATGCCGATGGCAGC
GAAGACTACTCGGTCACGCTGCAAATTCTTGCGTTGATGACCATGCTTGGCTTCTTGCCAGCGATGGTGATTTTGATGAC
CTCATTCACTCGTATCGTGGTGGTAATGTCCATCTTGCGACAAGCAATGGGTCTGCAACAAACGCCTTCGAACCAAGTCA
TCATTGGTATTGCGCTCTTTCTTACCTTCTTCGTGATGTCGCCGGTTCTGAATGAGATTAATGACAACGCGATTCAGCCT
TATTTGAATGAGCAAGTGACGGCGCGCCAAGCGTTCGATGCTGCGCAAGTTCCAATGAAAGCCTTTATGCTTAAGCAGAC
ACGAATCAAAGACCTAGAGACCTTTGTGAACATGTCTGGTGAGCAGGTAACGAACCCAGAAGATGTCTCTATGGCAGTGT
TGATTCCGGCATTCATTACCTCTGAGCTCAAGACCGCGTTCCAAATCGGTTTCATGTTGTTTCTGCCGTTTTTGATCATC
GACTTGGTTGTTGCCTCGGTGTTGATGGCGATGGGTATGATGATGCTTTCACCAATGATCGTATCACTGCCATTTAAGCT
GATGCTGTTTGTGCTGGTGGATGGTTGGAATCTGATATTGTCGACACTCGCCGGCAGTTTTGCCCTTTAG

Protein sequence : 
MTKDNSIRLMLSTFVLLIGVLFSSFSFAQAEESALPANLAEGDSVTVKAMENESSSSRSMSVGNGGGIPAFTMTTNADGS
EDYSVTLQILALMTMLGFLPAMVILMTSFTRIVVVMSILRQAMGLQQTPSNQVIIGIALFLTFFVMSPVLNEINDNAIQP
YLNEQVTARQAFDAAQVPMKAFMLKQTRIKDLETFVNMSGEQVTNPEDVSMAVLIPAFITSELKTAFQIGFMLFLPFLII
DLVVASVLMAMGMMMLSPMIVSLPFKLMLFVLVDGWNLILSTLAGSFAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 7e-27 44
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 9e-27 42
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 9e-27 42
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 8e-27 42
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 8e-27 42
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 6e-27 42
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 5e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M892_15305 YP_008527727.1 flagellar biosynthesis protein FliP VFG1259 Protein 2e-63 68
M892_15305 YP_008527727.1 flagellar biosynthesis protein FliP VFG2016 Protein 4e-59 64
M892_15305 YP_008527727.1 flagellar biosynthesis protein FliP VFG2494 Protein 3e-53 57
M892_15305 YP_008527727.1 flagellar biosynthesis protein FliP VFG2338 Protein 3e-47 53
M892_15305 YP_008527727.1 flagellar biosynthesis protein FliP VFG0044 Protein 1e-23 41