Gene Information

Name : M892_10035 (M892_10035)
Accession : YP_008526760.1
Strain :
Genome accession: NC_022269
Putative virulence/resistance : Virulence
Product : accessory colonization factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2185937 - 2186734 bp
Length : 798 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGAAATATCACATAATCGCGGCAGGATTGACCGCTCTGCTCACCAGTACTTCAACACTGGCGTCACCACTGCTCGACCC
GAGCATTATCCATAAACCAAACGATGGAGAAATCAATGTCTATGGCCCAGGAGGCCCCGACACCGCTCTCCGTCATGCCG
CAGAAGCTTTCAGTAAAAAAAGTAAGGTGACGGTAAACGTGATCGCTGGGCCTGAATCAAAGTGGACGAAAGATGCACAG
AAAAATGCTGACTTAATCTTTGGATCCGCAGAACAATCCATGAGCGCTTTTGTTGAAACCTACCCCTTTATTACCGATCA
AGATGTTGAGCCAGTGTACTTGCGCCGTGCAGTGATTGCGGTCCCAAAGGGGAACCCAAAAAATATCAACGGGATTAAAG
ACCTACTCGAAAAACCAGCGCGAATAGTCGTGACTGAAGGTTTAGGGGTTTACAACACTTCCGGTACAGGCGTTTGGGAA
GACGTCGCAGGACGCACGGGTTCACTGGCTGACGTACAGAACTTTCGCAAAAAAATCATTGCTTACGCCAAAGGCAGCGG
AGCAAGTTTCAAAGCTTTTCAACAACAAAAGGCTGATGCGTGGATCACTTGGATTCACTGGCCGCTCAACCATGCCGATA
AAGTCGACTATGTACAAATTGAGCCAGAAAGACGCATCTACCGAGATCTCACCCTAGCAAAGGCAAAAGGTGCAGATCCA
CAAACTCAAGCTTTCATTGATTTCGTTAACAGCAGTGAGGGAGAAACCTTTTTCACTCGCGAAGGTTGGACTCGTTAA

Protein sequence : 
MKYHIIAAGLTALLTSTSTLASPLLDPSIIHKPNDGEINVYGPGGPDTALRHAAEAFSKKSKVTVNVIAGPESKWTKDAQ
KNADLIFGSAEQSMSAFVETYPFITDQDVEPVYLRRAVIAVPKGNPKNINGIKDLLEKPARIVVTEGLGVYNTSGTGVWE
DVAGRTGSLADVQNFRKKIIAYAKGSGASFKAFQQQKADAWITWIHWPLNHADKVDYVQIEPERRIYRDLTLAKAKGADP
QTQAFIDFVNSSEGETFFTREGWTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
acfC AAK20768.1 accessory colonization factor AcfC Virulence VPI Protein 4e-41 43
acfC AAK20798.1 accessory colonization factor AcfC Virulence VPI Protein 4e-41 43
acfC AAA82706.1 AcfC Virulence VPI Protein 4e-41 43
VC0841 NP_230489.1 accessory colonization factor AcfC Virulence VPI-1 Protein 6e-41 43
acfC YP_001216322.1 accessory colonization factor AcfC Virulence VPI-1 Protein 6e-41 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M892_10035 YP_008526760.1 accessory colonization factor VFG0839 Protein 1e-43 44
M892_10035 YP_008526760.1 accessory colonization factor VFG0105 Protein 3e-41 43