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Name : M892_09830 (M892_09830) Accession : YP_008526719.1 Strain : Genome accession: NC_022269 Putative virulence/resistance : Virulence Product : T2SS/secreton-dependent pathway protein GspD Function : - COG functional category : - COG ID : - EC number : - Position : 2135699 - 2137741 bp Length : 2043 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : GTGAAACATTGGTTTAGCAAAAGTACTTGGTTACTTGCAGGGACACTACTCTGCGCTCCGGGTGCAATGGCGAACGAGTT TAGTGCCAGCTTCAAAGGCACTGATATTCAAGAATTCATCAATATTGTTGGTCGCAATCTAGAGAAGACCATCATCGTTG ACCCGTCTGTGCGCGGTAAGATTGACGTACGTAGTTACGACGTTCTTAACGAAAAGCAGTACTACAGCTTCTTCTTGAAC GTTCTTGAAGTGTATGGTTATGCCGTTGTCGAAATGGACAATGGTGTGTTGAAAGTCATCAAAGCGAAAGATTCAAAAAC GTCAGCAATCCCGGTTTTGGGTGATGACAGTGCGCAAGGCGACAGCGTGATTACCCGTGTGGTTGCGGTGCGTAATGTGT CGGTTCGTGAACTTTCTCCGCTACTGCGTCAACTGATTGATAACGCAGGTGCCGGTAACGTGGTGCACTACGATCCAGCT AACATCATCTTGATCACGGGTCGTGCTGCGGTAGTAAACCGCCTAGCGGAAATCATTAAGCGCGTTGACCAAGCGGGTGA CAAAGAAATCGAAGTCGTAGAGCTGCGCAATGCGTCTGCTTCTGAGATGGTGCGTATCGTTGATGCCCTGAACAAAACGA CCAACCAAAAGAGCACACCTGAATTCCTAGAGCCAAAAATCGTAGCGGATGATCGTACTAACTCCATCCTGATTTCTGGT GATCCTAAAGTTCGTGCGCGCCTGAAGCGTTTGATTCGTCAACTTGACGTTGAAATGGCGACCAAAGGCAATAACCGCGT GGTTTACCTAAAGTACGCGAAAGCGGAAGACCTAGTTGATGTACTAAAAGGCGTATCTGACAACTTACAGGCTGAGAAGC AAGCAGGTCAAAACGGCGCATCAAGTGCACAGCGTGGTGAAGTGGTGATTGCCGCTCACGAAGCAACCAACTCGCTCGTT TTGACTGCGCAGCCAGATATCATGATGGCGCTACAAGACGTGATTTCTCAACTGGATATCCGTCGTGCACAAGTTCTGAT TGAAGCGTTGATCGTTGAAATGTCTGAAGGCGACGGCATCAACCTTGGCGTTCAATGGGGTAACTTAGATACAGGTGCGG TAATCCAATACGGCAACACTGGCGCACAAATCGGTAATGTCATGGTTGGTCTTGAAGAAGCGAAAGATACAACGAAGACT GAGAGCTATTGGGATGAAGATGCTAATGGCGGAAGTGGTGATTGGAATACTCGTGAATATATCGAAGAAGGTGATTACTC GACACTAGCCGCTGCACTTGGTGGTGTTAATGGTGCAGCAATGAGCATCATGATGGGTGACTGGACTGCATTGATTACTG CTGTGTCATCGGATTCAAACTCAAACATCCTATCTTCTCCAAGCATTACAGTGATGGATAATGGCGAAGCGTCCTTCATC GTTGGTGAAGAAGTGCCTGTGATTACAGGCTCGACATCCGGGTCGAATAACGACAACCCATTCCAAACGGTTGACCGTAA AGAAGTCGGTATCAAACTTAAAGTTGTGCCTCAAATCAACGAAGGTGACTCAGTACAACTGACTATTGAGCAGGAAGTGT CAAACGTTCTGGGTGCAAATGGTGCGGTGGACGTGCGTTTCGCGAAGCGTCAGTTGAATACCTCTGTGATGATTCAAGAT GGTCAGATGCTAGTTCTGGGCGGTTTGGTTGATGAGCGTGCGTTAGAAAGTGAATCGAAAGTGCCGCTACTGGGTGATAT TCCTGTCATTGGTCAACTGTTCAAGTCGACTAGCACGCAAACAGAAAAACGTAACCTGATGGTGTTTATCAAGCCAACCA TCATCCGCGATGGTATGACGGCTGATGGTATCACTCAGCGTAAGTACAACTTCATTCGTGCAGAGCAGCTTTATAAAGCG CAAGAAGGCTTGAAGCTGATGGATGATTCAAAAGTTCCACTAATGCCTGAATTTGGTGAAGAGCGTAAACACCCTGCTGA AATTCAAGCGTTCATCGATCAGATGGTAAAGAATGATGGTTGA Protein sequence : MKHWFSKSTWLLAGTLLCAPGAMANEFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGKIDVRSYDVLNEKQYYSFFLN VLEVYGYAVVEMDNGVLKVIKAKDSKTSAIPVLGDDSAQGDSVITRVVAVRNVSVRELSPLLRQLIDNAGAGNVVHYDPA NIILITGRAAVVNRLAEIIKRVDQAGDKEIEVVELRNASASEMVRIVDALNKTTNQKSTPEFLEPKIVADDRTNSILISG DPKVRARLKRLIRQLDVEMATKGNNRVVYLKYAKAEDLVDVLKGVSDNLQAEKQAGQNGASSAQRGEVVIAAHEATNSLV LTAQPDIMMALQDVISQLDIRRAQVLIEALIVEMSEGDGINLGVQWGNLDTGAVIQYGNTGAQIGNVMVGLEEAKDTTKT ESYWDEDANGGSGDWNTREYIEEGDYSTLAAALGGVNGAAMSIMMGDWTALITAVSSDSNSNILSSPSITVMDNGEASFI VGEEVPVITGSTSGSNNDNPFQTVDRKEVGIKLKVVPQINEGDSVQLTIEQEVSNVLGANGAVDVRFAKRQLNTSVMIQD GQMLVLGGLVDERALESESKVPLLGDIPVIGQLFKSTSTQTEKRNLMVFIKPTIIRDGMTADGITQRKYNFIRAEQLYKA QEGLKLMDDSKVPLMPEFGEERKHPAEIQAFIDQMVKNDG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-156 | 54 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 6e-164 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| M892_09830 | YP_008526719.1 | T2SS/secreton-dependent pathway protein GspD | VFG2047 | Protein | 2e-152 | 53 |
