Gene Information

Name : Ser39006_0959 (Ser39006_0959)
Accession : YP_008521341.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : Methyltransferase domain containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1068523 - 1069356 bp
Length : 834 bp
Strand : +
Note : PFAM: Methyltransferase domain; KEGG: hypothetical protein

DNA sequence : 
ATGCAAACTGAACCCGAGGTTTTAACCGAACACACCCAGCTCATTTGCTCGACCAATATCGAGCGCATCGTCACCGGACG
TGATACCGCGCTGCAAAAGATAGAACAGCTTATCTATCAGTTGCAGGCGATTTCCCAGCTTACAACCGCCATTGGTGGCG
GCAGCGCTGAAGACTGGTCATTGAAACAAGGTCATCGCTATGACTGCTGGCTGACGGAACCCCTGAATAAGGCGATGCAG
GCTATTACCCGCACACTGGATCGCAATATCTGGCGTGACCTGATGTTGAAGTCCGGCATGCTGTCACTGATGGACGTCGA
AGCCCGTACCCAGTGGCACAAGAATCTGGATGAGGGCGAACTGCCGACTATCAGTGAAGCCAACATCCTTAGCACCTTTG
AGCAGCTTCACCAGAGCAAGCAGGCGGTGTTTGAACGTGGAGTGATCAATGTCTTCAAAGGATTATCATGGGATTACAAA
ACCAATCACCCTTGTTACTTTGGCAAGAAAATCATCATCAGCAACTTGGTCACATACAATCGTTGGGGCTTTGGCCTGAA
CTGGGGCTGGCGACGAGATCAATTGGCCGACTTGGAGCGTATGCTGTATCTGTTGGACGGCAAACCTATTCCCGACAATC
GGGGCGATCTCACCATTCGGCTGATGGACCATATCCGCGATAATCCTCACAAGCAGGTTTACGAAGATGAATTTTTCACT
ATTCGTTATTTTCAGAAAGGCACCGGACATCTCACCTTTAAACGCCCCGATCTGATCGATCAGATGAACGATATTATTGC
CAAGCATTATCCAGGGATGTTGGCGGCGAGGTGA

Protein sequence : 
MQTEPEVLTEHTQLICSTNIERIVTGRDTALQKIEQLIYQLQAISQLTTAIGGGSAEDWSLKQGHRYDCWLTEPLNKAMQ
AITRTLDRNIWRDLMLKSGMLSLMDVEARTQWHKNLDEGELPTISEANILSTFEQLHQSKQAVFERGVINVFKGLSWDYK
TNHPCYFGKKIIISNLVTYNRWGFGLNWGWRRDQLADLERMLYLLDGKPIPDNRGDLTIRLMDHIRDNPHKQVYEDEFFT
IRYFQKGTGHLTFKRPDLIDQMNDIIAKHYPGMLAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 5e-83 62
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 5e-83 61
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 5e-83 61
unnamed AAL57572.1 unknown Not tested LEE Protein 8e-81 61
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 8e-82 61
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 9e-82 61
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 7e-82 61
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 8e-81 61
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 7e-81 60
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 1e-78 59
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 1e-78 59
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 1e-78 59
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 6e-79 59
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 1e-79 59
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 1e-70 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_0959 YP_008521341.1 Methyltransferase domain containing protein VFG1533 Protein 5e-82 61
Ser39006_0959 YP_008521341.1 Methyltransferase domain containing protein VFG0666 Protein 6e-79 59
Ser39006_0959 YP_008521341.1 Methyltransferase domain containing protein VFG1685 Protein 7e-71 56