Gene Information

Name : Ser39006_0848 (Ser39006_0848)
Accession : YP_008521230.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Unknown
Product : Tex-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 940227 - 942551 bp
Length : 2325 bp
Strand : -
Note : KEGG: yhgF, transcriptional accessory protein; PFAM: Tex-like protein, RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold-containing protein, RNA-binding domain, S1

DNA sequence :
ATGAATAACGTATTAAACAAGATTATTGCTGGCGAATTACAGGCACGTACCGAACAGGTCAGCGCGGCCATTCAGTTGCT
AGATGAAGGCAACACGGTTCCCTTTATCGCCCGCTACCGTAAAGAAGTTACCGGTGGGCTGGACGATACTCAACTACGTC
AGTTGGAAACTCGTCTCGTCTATCTGCGCGAGCTGGAAGAACGCCGGCAGACCATCCTGAAGTCGATTGATGAACAAGGC
AAATTAACCGAACCACTGGCTGCCGCCATCAATACGACGCTTAACAAAACGGAACTGGAAGATCTCTATCTCCCATATAA
ACCCAAACGCCGCACCCGGGGGCAGATTGCCCTTGAAGCCGGCCTGGAACCACTGGCTGACAGCCTGTGGAATGACCCGA
GCCAGACACCGGAACAGATCGCCGAAACCTACATCAATGTCGACAACGGTGTGGCGGATGTCAAAGCAGCGCTGGACGGC
GCACGCTACATCCTGATGGAGCGCTTTGCCGAAGATGCGGCCTTGCTGGCCAAAGTGCGTAACTACCTATGGAAAAACGC
GCATCTGGTTTCCGGTGTGGTGGCAGGCAAAGAGGAAGCCGGTGCCAAATTCCGCGACTATTTCTCACACCACGAACCGA
TTGCCCAGGTTCCTTCTCACCGAGCGCTGGCCATGTTCCGTGGTCGTAATGAAGGCGTGTTGCAATTATCACTGAATGCC
GATCCGCAATTTGATGAACCGCCCCGTGAAAGCCATTGCGAACAGATAATCATCGACCACCTGGGTTTGCGTCTCAATAA
CGCCCCGGCAGATGATTGGCGGCGTGCGGTAGTGAACTGGACCTGGCGTATTAAAGTGCTACTGCATCTGGAAACTGAAC
TGATGAGCAGCGTGCGTGAAAAAGCGGAAGATGAAGCCATTAACGTTTTCGCCCGTAATATGCACGATTTGCTGATGGCG
GCACCAGCCGGGATGCGAGCCACTATGGGACTGGATCCCGGTCTGCGTACTGGTGTAAAAGTGGCGGTGGTGGATGCCAC
TGGCAAATTGGTCGCCACCGACACCATTTATCCGCACACCGGTCAGACTGCCAAAGCCGCATCCTCCGTCGCCGCATTGT
GCATCAAGCATCAGGTTGAGTTGGTAGCGATTGGTAACGGCACCGCCTCGCGTGAAACCGAGCGTTTCTTTCTGGATACC
CAAAAACAGTTCCCGGATATCAAGGCACAGAAAGTGATCGTCAGTGAAGCTGGTGCGTCAGTGTATTCGGCTTCTGAGCT
GGCGGCGCTGGAATTCCCCGATTTGGATGTTTCCTTGCGTGGGGCGGTATCTATTGCCCGTCGCCTGCAAGACCCGCTCT
CCGAACTGGTCAAAATCGATCCGAAATCCATCGGTGTCGGCCAGTATCAACATGATGTCAGCCAAAGCCTGCTAGCGAAA
AAACTGGATGCCGTGGTAGAGGACTGCGTAAATGCCGTCGGCGTCGATCTGAATACCGCGTCAGTACCACTGCTGACCCG
TGTAGCCGGTCTCACCCGCATGATGGCACAAAATGTGGTGGCCTGGCGTGATGAAAATGGACGCTTCCGCAACCGTGATC
AACTGTTAAAGGTCAGCCGTTTGGGCCCGAAAGCCTTTGAACAGTGTGCAGGGTTCCTGCGCATCAACCACGGCGACAAC
CCACTGGACGCCTCTACCGTTCATCCGGAAGCCTATCCGCTGGTAGAGCGTATTCTGGCGGCAACCGAGCAGAAATTGCA
GGATATCATGGGCAATGCCAATGCGTTGCGCAGCCTTAAACCGACGAATTTCACTGACGAACGTTTCGGTCTGCCAACCG
TCACCGATATTCTGAAAGAACTGGAAAAACCAGGGCGCGACCCACGTCCAGAGTTCAAGACCGCCAGCTTCGCCGAAGGT
GTGGAAACGATGAATGATCTAATGCCGGGTATGATTCTGGAGGGCGCAGTCACCAACGTGACCAATTTCGGCGCTTTCGT
AGATATTGGGGTGCATCAGGACGGTTTGGTACATATTTCGTCGCTAGCCGACCGTTATGTAGACGACCCGCACAAAGTCG
TGAAGGCCGGTGACATCGTGAAAGTAAAAGTGCTGGAAGTGGATCTGCAACGTAAACGCATCGCGCTCACCATGCGCCTG
GATGAGCAGCCGGGAGAAGCCACCAGCCGTCGGAGCAGTGAGGCTCGGGACAATACACCACCGCGACAGCCTGGCGGTAA
AAACCGGCCCCGCAGTGGGAACAACGCACCGGCAGGTAACAGCGTCATGGGTGACGCGCTAGCGGCTGCATTTAAAAAAC
GCTGA

Protein sequence :
MNNVLNKIIAGELQARTEQVSAAIQLLDEGNTVPFIARYRKEVTGGLDDTQLRQLETRLVYLRELEERRQTILKSIDEQG
KLTEPLAAAINTTLNKTELEDLYLPYKPKRRTRGQIALEAGLEPLADSLWNDPSQTPEQIAETYINVDNGVADVKAALDG
ARYILMERFAEDAALLAKVRNYLWKNAHLVSGVVAGKEEAGAKFRDYFSHHEPIAQVPSHRALAMFRGRNEGVLQLSLNA
DPQFDEPPRESHCEQIIIDHLGLRLNNAPADDWRRAVVNWTWRIKVLLHLETELMSSVREKAEDEAINVFARNMHDLLMA
APAGMRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQTAKAASSVAALCIKHQVELVAIGNGTASRETERFFLDT
QKQFPDIKAQKVIVSEAGASVYSASELAALEFPDLDVSLRGAVSIARRLQDPLSELVKIDPKSIGVGQYQHDVSQSLLAK
KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNVVAWRDENGRFRNRDQLLKVSRLGPKAFEQCAGFLRINHGDN
PLDASTVHPEAYPLVERILAATEQKLQDIMGNANALRSLKPTNFTDERFGLPTVTDILKELEKPGRDPRPEFKTASFAEG
VETMNDLMPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLADRYVDDPHKVVKAGDIVKVKVLEVDLQRKRIALTMRL
DEQPGEATSRRSSEARDNTPPRQPGGKNRPRSGNNAPAGNSVMGDALAAAFKKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 61