|
Name : Ser39006_0686 (Ser39006_0686) Accession : YP_008521068.1 Strain : Serratia sp. ATCC 39006 Genome accession: NC_022268 Putative virulence/resistance : Unknown Product : Xylose isomerase Function : - COG functional category : - COG ID : - EC number : 5.3.1.5 Position : 754006 - 755325 bp Length : 1320 bp Strand : - Note : PFAM: Xylose isomerase domain-containing protein TIM barrel; TIGRFAM: xylose isomerase; HAMAP : Xylose isomerase; KEGG: xylA, D-xylose isomerase DNA sequence : ATGCACGCTTATTTTGATCAAATTGAAAAAGTCCGTTTTGAGGGTACTAACAGTACCAATCCATTCGCTTTTCGTCATTA CAATCCCGATCAGGAAATTCTTGGTAAGCGAATGGCCGACCATCTGCGTTTTGCCGTTTGCTACTGGCATACTTTCTGTT GGAATGGTTCCGACATGTTTGGTGTCGGCGCGTTCGAACGTCCGTGGCAACAGTCAGGTGACGCCCTGGCCCTGGCAAAA CGTAAAGCCGATATCGCCTTTGAGTTTCTCAGCAAGCTGGGTGCCCCTTACTACTGTTTTCATGATGTGGATGTTTCACC GGAAGGCAACTCACTGAAAGAGTATCTGAACAATTTCGCTGAAATGGTGGATATTCTGGCAGCCAAGCAGCAGGAAAGTG GCGTGAAACTTCTATGGGGAACTGCAAACTGCTTTACCCATCCACGTTATGGGGCCGGGGCCGCGACCAATCCCGATCCC GAAGTGTTTGCCTGGGCCGCGACACAGGTGTTCACCGCCATGAACGCCACCAAAACGCTGGGTGGCGAGAACTATGTGTT ATGGGGTGGCCGTGAAGGCTATGAGACACTGCTGAATACCGACCTGCGTCAGGAACGTGAACAGATTGGTCGCTTTATGC AGATGGTGGTGGAACACAAACATAAAATAGGTTTCCAGGGGACATTGCTTATTGAACCCAAGCCACAGGAGCCCACAAAA CATCAGTACGACTATGACGTCGCCACAGTCTATGGTTTCCTGAAACAGTTTGGACTGGAAAAAGAGATTAAGGTTAACGT CGAGGCGAATCATGCGACATTGGCCGGACACACTTTCCACCATGAAATTGCAACGGCCATTGCACTGGGTATTTTCGGTT CTGTCGATGCCAATCGCGGTGACCCGCAATCAGGTTGGGATACCGATCAATTCCCCAATAGTGTCGAAGAGAATGCCTTG GTAATGCATGAAATCCTCAAAGCCGGAGGGTTTACTACCGGGGGGCTTAACTTCGATGCCAAAGTCCGCCGTCAAAGCAC TGACAAATATGACCTGTTCTACGGCCACATTGGTGCGATGGATACAATGGCGCTATCGTTGAAGGTTGCCGCTCGCATGA TCGAGGATAACCAGCTTAATCAATTGGTTGCCAAACGCTATGCTGGCTGGAACAGTGAGTTGGGGCAACAAATCCTACAA GGTAAAGCATCTCTGGAAATGCTCTCGAAATACGCAGAAAGTCATCAGTTGGCGCCACATCACCAGAGTGGACGTCAGGA ACGCCTGGAAAATCTGGTTAATCAGTATCTGTTTGATTAA Protein sequence : MHAYFDQIEKVRFEGTNSTNPFAFRHYNPDQEILGKRMADHLRFAVCYWHTFCWNGSDMFGVGAFERPWQQSGDALALAK RKADIAFEFLSKLGAPYYCFHDVDVSPEGNSLKEYLNNFAEMVDILAAKQQESGVKLLWGTANCFTHPRYGAGAATNPDP EVFAWAATQVFTAMNATKTLGGENYVLWGGREGYETLLNTDLRQEREQIGRFMQMVVEHKHKIGFQGTLLIEPKPQEPTK HQYDYDVATVYGFLKQFGLEKEIKVNVEANHATLAGHTFHHEIATAIALGIFGSVDANRGDPQSGWDTDQFPNSVEENAL VMHEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALSLKVAARMIEDNQLNQLVAKRYAGWNSELGQQILQ GKASLEMLSKYAESHQLAPHHQSGRQERLENLVNQYLFD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 2e-106 | 50 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 1e-106 | 50 |
