Gene Information

Name : Ser39006_0681 (Ser39006_0681)
Accession : YP_008521063.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : Aldehyde Dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 747832 - 749370 bp
Length : 1539 bp
Strand : +
Note : PFAM: Aldehyde Dehydrogenase; KEGG: aldehyde dehydrogenase

DNA sequence :
ATGGCACATGACACGTCAGGAAGCCGGCTTATGTCCGGCGAATATGGATATGCTCTTACTCTGAAAAAACGCTATGACAA
TTTTATTGGTGGCGCCTGGGTTCCACCGGCTAGCGGAGAATACTACGTTAATCTGACTCCGATAACCGGTCAGCCACTAT
GTGAAGTTGCCAGCTCCAGTAATAAAGATGTGGATTATGCGCTTGATGCTGCGCATAAAGCCAAGGCGGAATGGGGAGCC
ATGTCGGCCGCAGAGCGGGCAACGATCTTGAATCGCATTGCTGATCGTATGGAGCAGAATATCGATCTGCTGGCGAGTGC
GGAAACCTGGGATAATGGTAAACCGATTCGTGAAACCACTAATGCAGACGTTCCGCTCGGTATTGACCATTTCCGCTACT
TTGCCGCCTGTATTCGCGCACAGGAAGGTGCCATCAGTGAAATCGACAAAGACACGGTGGCTTATCACTTCCATGAGCCG
CTGGGGGTGGTGGGGCAAATTATTCCCTGGAACTTCCCACTGTTGATGGCCTGCTGGAAAATGGCTCCGGCGCTGGCCGC
GGGTAACTGTATCGTGCTGAAACCCGCCAAACTGACACCACTCTCCGTGCTGATGCTGATGGAGCTGATTCAGGATCTGT
TACCTCCAGGTGTGCTTAATGTGGTGAACGGTTCCGGTAGTGAGATTGGCGAGTATCTGGCGACATCGCCCCGTATCGCT
AAAGTGGCGTTTACCGGCTCGACAGAAGTGGGTCAGCAGATCATGGGTTACGCGGCGCAGAATGTCATCCCGGTAACGTT
GGAACTGGGGGGCAAGTCTCCCAATATCTTCTTTGCTGACGTTATGGATAAAGAAGACAGCTTCTTTGACAAGGTTCTTG
AAGGGTTTACCCTGTTTGCCTTTAATCAGGGGGAAGTCTGTACCTGTCCGAGCCGTGCGCTGGTGCAGGAATCTATTTAT
GAACGCTTTATGGAGCGAGCCATCAAGCGAGTGGAAGCTATCCGCGTTGGCAACCCGCTCGATAGCAAAACCATGATGGG
GGCGCAGGTTTCTGCCGGTCAGTTGGATACCATCCTTAACTATATTGATATTGGCAAGAAAGAAGGCGCGCGAGTGTTGA
CGGGGGGAAATCGTAAGACACTGCCTGGCGATTTAACGCAGGGTTACTATCTGGAACCTACCATTCTTTTTGGGGACAAC
AGCATGCGAGTGTTCCAGGAAGAAATATTTGGTCCGGTACTGGCCGTGACTACCTTCAAAACCATGGATGATGCGCTGGA
AATCGCTAATGATACGGTATATGGGTTGGGTGCTGGGGTATGGAGCCGCAATGCCAACATTGCTTATCGTATGGGGCGTG
GTATTCAGGCCGGTCGTGTGTGGACCAACTGCTATCATGCCTATCCGGCACATGCGGCGTTTGGAGGGTACAAGCAGTCA
GGTATGGGGCGTGAAAACCACAAGATGATGCTGGATCATTATCAGCAAACCAAATGTCTGCTGGTAAGTTACTCCGAGCA
GCCGATGGGTCTGTTCTAA

Protein sequence :
MAHDTSGSRLMSGEYGYALTLKKRYDNFIGGAWVPPASGEYYVNLTPITGQPLCEVASSSNKDVDYALDAAHKAKAEWGA
MSAAERATILNRIADRMEQNIDLLASAETWDNGKPIRETTNADVPLGIDHFRYFAACIRAQEGAISEIDKDTVAYHFHEP
LGVVGQIIPWNFPLLMACWKMAPALAAGNCIVLKPAKLTPLSVLMLMELIQDLLPPGVLNVVNGSGSEIGEYLATSPRIA
KVAFTGSTEVGQQIMGYAAQNVIPVTLELGGKSPNIFFADVMDKEDSFFDKVLEGFTLFAFNQGEVCTCPSRALVQESIY
ERFMERAIKRVEAIRVGNPLDSKTMMGAQVSAGQLDTILNYIDIGKKEGARVLTGGNRKTLPGDLTQGYYLEPTILFGDN
SMRVFQEEIFGPVLAVTTFKTMDDALEIANDTVYGLGAGVWSRNANIAYRMGRGIQAGRVWTNCYHAYPAHAAFGGYKQS
GMGRENHKMMLDHYQQTKCLLVSYSEQPMGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-149 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-155 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-155 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-155 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-154 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_0681 YP_008521063.1 Aldehyde Dehydrogenase VFG0082 Protein 6e-150 64