Gene Information

Name : Ser39006_0626 (Ser39006_0626)
Accession : YP_008521008.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Virulence
Product : PTS system Galactitol-specific IIC component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 685474 - 686736 bp
Length : 1263 bp
Strand : -
Note : PFAM: PTS system Galactitol-specific IIC component; KEGG: Putative integral membrane protein

DNA sequence :
ATGCTGCAATTTATTATGATGGATGTTCTCGGAACACCCGCAATATTAGTCGGTCTTTTTTCATTGCTGGGGTTAATACT
CCAAAAGAAAGCACTCTCCGATGTTATTTCCGGCACTCTCAAAACCGTTATGGGTTTTGTTATTCTCATCGCCGGCGCGA
AGTTAATTGCAACCACGTTGAATATTTTCAGTCAATTATTTGAACACTCTTTCAATATGCAGGGTGTCGTGCCAAATAAT
GACGTCATTGCCGCCCTGGCACAGGATAATTTCGGCACAGAAACCGCCATGATCATGGTTTTTGGCATGGCTGTTAATAT
CATTCTTGCGCGTATTACCCCGCTGAAATACATCTTCCTGACAGGTCACCACACGCTGTATATGGCAGCCTTGCTGGCCG
TTATTCTCTCCACCGGAGGCATACATGGCGCGGGGCTGATTATCATTGGGTCACTGATTCTGGGTACCTTAATGGTGGTC
AGTCCGGCAATCCTGCAACCGTTTACCCGTAAAATCACCAATTCGGATGATTTGGCACTAGGGCATTTTGGCTCAACCGG
ATATCTTCTCGCCGCGCTGGTGGGCAAAGTGGTAGGAAAAGGCAGCCCTTCCATTGAGGAGTTGAAAGTCCCGAAGACAC
TGAACTTTCTGCGTGACTCCTCCGTTGCCATTTCATTGACGATGATGATTTTGTTTATCGTTCTGGTGATCATCGCCGGA
AAAGAGTTCACTGAAACGCAGGTAAGCAGTGGACAAAATTACATTGTCTTTGCCATTATCCAGTCCATTACTTTTGCCGC
CGGTGTGTATATTATTCTGGCCGGTGTACGGATGGTGATTTCAGAAATTGTTCCGGCATTCAAAGGGATTGCAGATAAAC
TGGTTAAAGACGCCAAACCGGCACTGGATTGCCCAACGGTATTTCCCTTCGCCCCCAACGCCGTCATTATTGGCTTTCTG
TCCAGCTTTCTGGCTGGGTTAATCAGCATGTTTCTCTGCCCGCTATTTGGGCTTAGCGTCATTGTCCCCGGACTAGTGCC
CCACTTCTTCTGTGGCGCCACCGCAGGAGTTTACGGCAATATTACCGGTGGCCGACGTGGGGCGGTTATCGGTGCCTTTG
CCCAGGGGTTACTGATCTCTTTCCTGCCAGCCATTTTATTACCCCTGATGGGAGAACTGGGATTTGCTTCCACCACCTTT
GGTGATGCCGATTTCGGTATTGTCGGCATTATCCTCGGGAAAACCATTGCCTTTTTTCATTAA

Protein sequence :
MLQFIMMDVLGTPAILVGLFSLLGLILQKKALSDVISGTLKTVMGFVILIAGAKLIATTLNIFSQLFEHSFNMQGVVPNN
DVIAALAQDNFGTETAMIMVFGMAVNIILARITPLKYIFLTGHHTLYMAALLAVILSTGGIHGAGLIIIGSLILGTLMVV
SPAILQPFTRKITNSDDLALGHFGSTGYLLAALVGKVVGKGSPSIEELKVPKTLNFLRDSSVAISLTMMILFIVLVIIAG
KEFTETQVSSGQNYIVFAIIQSITFAAGVYIILAGVRMVISEIVPAFKGIADKLVKDAKPALDCPTVFPFAPNAVIIGFL
SSFLAGLISMFLCPLFGLSVIVPGLVPHFFCGATAGVYGNITGGRRGAVIGAFAQGLLISFLPAILLPLMGELGFASTTF
GDADFGIVGIILGKTIAFFH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39291.1 hypothetical protein Not tested LPA Protein 7e-111 61
vpeC ADD91725.1 putative PTS system-specific IIC component VpeC Virulence PAI-I AL862 Protein 7e-111 61
ORF8 AAK27335.1 unknown Not tested PAI-I AL862 Protein 7e-111 61