Gene Information

Name : Ser39006_0528 (Ser39006_0528)
Accession : YP_008520910.1
Strain : Serratia sp. ATCC 39006
Genome accession: NC_022268
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 580379 - 582460 bp
Length : 2082 bp
Strand : -
Note : TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein, helicase domain-containing protein, nucleic acid binding OB-fold tRNA/helicase-type; KEGG: ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase , helicase domain-

DNA sequence :
ATGCACGGCCGCCTGCTGAACGCCCAACTGCTGAGCACCCTTGCCGGCGTAGGAGCAACCCAGGCGGCGAAACTTGCCCG
TATCGGCCTGGAAACAGTAGAAGATCTGTTACTTCACTTACCGTTACGCTATGAAGACCACACTCATCTTTATCTCATCA
ACGACCTGCTGCCGGGTATTTATGCCACGGTAGAGGGTGAAATATTACGTTGTGATGTGACTTTTGGTCGCCGCCGAATG
CTGACCTGCCAGATCAGCGATGGCAGTGGCATGCTGACATTGCGTTTTTTCAACTTCAATGCGGCAATGAAAAATAGCCT
GTCACCAGGACAACGGGTGCTGGCTTATGGTGAAATTCGACGCGGTAAACTTGGTGCCGAAATCATTCACCCCGAATACC
GGGTTCAGGGTGATAACACACCAGTAGAATTGCAGGAAACCTTGACGCCGGTGTATCCCACCACCGACGGTATTCGTCAG
GCCACGCTGCGCAAACTGACGGATCAGGCACTCTCACTGCTGGATACCAACCCGATTGACGAGCTACTGCCGCAGGAGCT
CAGTCACACGCTTATCAGCTTGTCCGACGCACTGCGCATATTGCACCGACCACCGCCAGACATGCAATTAAGCGAACTGG
AGCAAGGCAAGCATCCAGCTCAGCAGCGATTAATAATGGAAGAACTGCTGGCCCACAATCTGAGTATGCTGGCGGTACGC
GCAGGTACGCAACGCCACCAGGCATTACCACTACCGCCCGATAACAGCCTCAAGCTACGTCTGTTAGCCGCCTTGCCATT
CACACCCACTCAGGCACAGGAACGGGTGGTGGCAGAAATAGAAAACGATATGAGCCGGCCATTCCCGATGATGAGACTGG
TTCAGGGGGACGTCGGTTCTGGCAAAACCCTGGTCGCGGCCCTCGCTGCGCTAAGAGCGATTACCCACGGTAAGCAGGTG
GCGCTGATGGCCCCGACCGAACTTCTGGCAGAACAGCATGCCAATAATTTTCGCCACTGGTTTGCACCATTGGGTATTGA
GGTAGGTTGGCTGGCGGGTAAACAGAAAGGCAAAGCTCGGCAAAACCAACAGGATGCCATTGCCAGCGGTCAGGTTTCCA
TGGTGGTGGGAACGCACGCGATCTTCCAGCAACAGGTGCAGTTTAACGGACTGGCACTGGTAATTATTGATGAACAGCAC
CGTTTCGGCGTGCATCAGCGGCTGGCATTGTGGGAGAAAGGTGAAGAGCAAGGATTCCATCCTCATCAACTCATCATGAC
CGCTACACCCATTCCACGCACGCTGGCAATGACAGCTTACGCTGATCTGGATACGTCGATCATTGATGAGCTACCTCCCG
GCCGGACACCAGTGACCACCGTGGCAATTCCTGATTCCCGACGCAGCGACATTGTTCGACGAGTTGAACATGCCTGCCAG
CAGGAAGGTCGCCAGGCCTATTGGGTTTGTACGTTGATTGAAGAATCCGAACTGCTGGAAGCACAAGCAGCAGAAGCCAC
CTGCCAGGGGCTGCGGGAAGCGCTTCCCGGACTGACTATCGGACTCGTGCATGGCCGAATGAAGGCACAGGAAAAACAGG
ATGTCATGGCGGATTTTAAGCAAGGCAACATCCAACTGTTGGTGGCCACGACAGTAATCGAAGTAGGGGTCGATGTTCCT
AATGCCAGCCTGATGATTATCGAAAACCCGGAACGACTGGGACTGGCACAACTTCATCAGTTGCGGGGACGTGTAGGTCG
CGGGGCCATCGCGTCTCATTGCGTCCTGCTTTACAAATCACCGCTGAGCAAAACGGCCCAAAAGCGCTTGCAGGTACTAC
GCGACAGCAACGATGGTTTTGTGATTGCACAACGGGATTTGGAAATCCGTGGCCCCGGCGAACTTCTGGGTACCCGGCAA
ACCGGTAACACCGAATTCAAAGTAGCTGATTTACTGCGCGATCAGGCATTGATCCCTCAGGTACAACGGACCGCACGACA
TATCCACGAAAACTATCCCGAACACGCCAAAGCGCTAGTCGAACGCTGGCTGCCAGAACGAACGCGTTATACCAACGCGT
AA

Protein sequence :
MHGRLLNAQLLSTLAGVGATQAAKLARIGLETVEDLLLHLPLRYEDHTHLYLINDLLPGIYATVEGEILRCDVTFGRRRM
LTCQISDGSGMLTLRFFNFNAAMKNSLSPGQRVLAYGEIRRGKLGAEIIHPEYRVQGDNTPVELQETLTPVYPTTDGIRQ
ATLRKLTDQALSLLDTNPIDELLPQELSHTLISLSDALRILHRPPPDMQLSELEQGKHPAQQRLIMEELLAHNLSMLAVR
AGTQRHQALPLPPDNSLKLRLLAALPFTPTQAQERVVAEIENDMSRPFPMMRLVQGDVGSGKTLVAALAALRAITHGKQV
ALMAPTELLAEQHANNFRHWFAPLGIEVGWLAGKQKGKARQNQQDAIASGQVSMVVGTHAIFQQQVQFNGLALVIIDEQH
RFGVHQRLALWEKGEEQGFHPHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAIPDSRRSDIVRRVEHACQ
QEGRQAYWVCTLIEESELLEAQAAEATCQGLREALPGLTIGLVHGRMKAQEKQDVMADFKQGNIQLLVATTVIEVGVDVP
NASLMIIENPERLGLAQLHQLRGRVGRGAIASHCVLLYKSPLSKTAQKRLQVLRDSNDGFVIAQRDLEIRGPGELLGTRQ
TGNTEFKVADLLRDQALIPQVQRTARHIHENYPEHAKALVERWLPERTRYTNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 2e-100 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ser39006_0528 YP_008520910.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 60